CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g21780

Gene name UGT71B6 (UDP-glucosyl transferase 71B6)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g21780 821732 UGT71B6 (UDP-glucosyl transferase 71B6) Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates. S.X. H.G.
0.59 74.7 At3g09020 820054 alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein F:transferase activity, transferring glycosyl groups, transferase activity;P:biological_process unknown;C:Golgi stack;MPOB S.X. H.G.
0.57 73.8 At3g52400 824405 SYP122 (SYNTAXIN OF PLANTS 122) syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathway S.X. H.G.
0.55 70.6 At4g33050 829442 EDA39 (embryo sac development arrest 39) F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFO S.X. H.G.
0.51 66.3 At1g72900 843621 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMO S.X. H.G.
0.48 62.5 At2g15390 816031 FUT4 Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1. S.X. H.G.
0.46 59.8 At1g24140 839026 matrixin family protein F:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAF S.X. H.G.
0.45 58.3 At4g14365 827080 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA S.X. H.G.
0.44 57.2 At4g39640 830118 GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast. S.X. H.G.
0.44 57.2 At1g01560 839523 ATMPK11 member of MAP Kinase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
133.3 99.9 GSM205159 protoplast_KIN10_rep1 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
123.2 99.9 E-MEXP-1443-raw-cel-1581869921
118.2 99.9 E-MEXP-807-raw-cel-1173273252
101.3 99.9 GSM205185 protoplast_KIN10_rep2 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
90.0 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
89.1 99.9 E-MEXP-807-raw-cel-1173273144
77.7 99.9 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
71.8 99.9 GSM131395 AtGen_6-7311_UV-Bstress-Shoots-3.0h_Rep1 GSE5626 AtGenExpress: Stress Treatments (UV-B stress)
68.0 99.9 GSM204069 protoplast_hypoxia_rep1 GSE8248 Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
64.7 99.8 E-MEXP-1094-raw-cel-1379507273
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.38 2e-53 210 At3g21800 821734 UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 4'-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBOF C.G. S.X.
0.42 4e-30 133 At3g21790 821733 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMBOVF C.G. S.X.
0.28 6e-26 119 At4g15260 827192 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF C.G. S.X.
0.26 9e-22 105 At3g21750 821729 UGT71B1 (UDP-GLUCOSYL TRANSFERASE 71B1) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF C.G. S.X.
0.31 4e-21 103 At4g15280 827194 UGT71B5 (UDP-GLUCOSYL TRANSFERASE 71B5) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF C.G. S.X.
0.30 6e-20 99 At3g21760 821730 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOF C.G. S.X.
0.04 5e-8 59 At1g78270 844162 AtUGT85A4 (UDP-glucosyl transferase 85A4) F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBFO C.G. S.X.
0.16 2e-4 48 At4g15270 827193 glucosyltransferase-related F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;P C.G. S.X.
0.02 7e-4 46 At4g14090 827046 UDP-glucoronosyl/UDP-glucosyl transferase family protein The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 34 Glycine max GmaAffx.45589.1.S1_at BG882015 - - 5e-2 At2g20613 unknown protein C.G. S.X.
0.02 5e+0 32 Hordeum vulgare Contig6014_at Contig6014 - - 5e+0 At5g38540 jacalin lectin family protein C.G. S.X.
0.02 6e-3 44 Oryza sativa Os01g0735300 AK106947.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 9e-4 At5g17050 UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2) C.G. S.X.
0.03 1e+0 36 Populus trichocarpa PtpAffx.224501.1.S1_at pmrna43092 hypothetical protein - 5e-5 At2g29730 UGT71D1 (UDP-GLUCOSYL TRANSFERASE 71D1) C.G. S.X.
0.02 7e-1 36 Triticum aestivum Ta.13084.2.S1_at BG904606 - - 3e+0 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) C.G. S.X.
0.04 5e-2 38 Vitis vinifera 1621418_at CB340794 - - 2e-3 At3g21800 UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8) C.G. S.X.
0.02 5e+0 32 Zea mays Zm.10814.1.A1_at CF051676 hypothetical protein LOC100280349 - 1e-1 At2g36420 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0006970 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
X GO:0009651 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
X GO:0009737 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
S GO:0046345 The chemical reactions and pathways resulting in the breakdown of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00359 Glucosyltransferase

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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