Gene omics information

Query gene ID At3g21770
Gene name peroxidase 30 (PER30) (P30) (PRXR9)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4253.9At3g21770821731peroxidase 30 (PER30) (P30) (PRXR9)F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBMS.X.H.G.
0.6781.6At1g31050839991transcription factorF:transcription factor activity;P:regulation of transcription;C:nucleus;PS.X.H.G.
0.6075.7At3g49860824148ATARLA1B (ADP-ribosylation factor-like A1B)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.S.X.H.G.
0.6075.7At4g24180828519-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVS.X.H.G.
0.5065.3At1g60680842362aldo/keto reductase family proteinF:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:unknown;BOMFPAS.X.H.G.
0.5065.3At3g12090820383TET6 (TETRASPANIN6)Member of TETRASPANIN familyS.X.H.G.
0.2319.3At5g10580830923unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
64.999.8GSM184495Endodermis&Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
55.799.8GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
54.199.8GSM184496Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
52.399.8GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
51.299.8GSM184499Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
39.599.8GSM184494Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
38.499.8GSM184523Stele root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
33.499.7GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
31.099.7GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
30.299.7GSM184524Stele root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.201e-757At1g05260837028RCI3 (RARE COLD INDUCIBLE GENE 3)Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.C.G.S.X.
0.061e-448At3g01190821314peroxidase 27 (PER27) (P27) (PRXR7)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMC.G.S.X.
0.045e-446At5g15180831370peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
0.035e-446At4g08770826447peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFC.G.S.X.
0.038e-342At1g71695843498peroxidase 12 (PER12) (P12) (PRXR6)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall, vacuole, membrane, plant-type cell wall;PFOBC.G.S.X.
0.031e-138At4g08780826448peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFMC.G.S.X.
0.021e-138At3g22370821806AOX1A (ALTERNATIVE OXIDASE 1A)Encodes an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited.C.G.S.X.
0.031e-138At2g19960816515hAT dimerisation domain-containing protein / transposase-relatedF:protein dimerization activity;P:biological_process unknown;C:cellular_component unknown;MPOC.G.S.X.
0.051e-138At1g05250838206peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-242Glycine maxGmaAffx.92917.1.S1_s_atCF808642peroxidase-6e-3At3g21770peroxidase 30 (PER30) (P30) (PRXR9)C.G.S.X.
0.034e+032Hordeum vulgareHV03D18u_atHV03D18u--1e+1At4g08869-C.G.S.X.
0.044e-344Oryza sativaOsAffx.12715.1.S1_at---0C.G.S.X.
0.072e-138Populus trichocarpaPtpAffx.225658.1.S1_s_atpmrna45158hypothetical protein-6e-11At1g14550anionic peroxidase, putativeC.G.S.X.
0.088e-342Triticum aestivumTa.9288.3.S1_x_atBJ256761--4e-3At3g21770peroxidase 30 (PER30) (P30) (PRXR9)C.G.S.X.
0.031e-136Vitis vinifera1607942_atCF514754hypothetical protein LOC100255112-1e-6At1g05260RCI3 (RARE COLD INDUCIBLE GENE 3)C.G.S.X.
0.041e-240Zea maysZm.2766.1.A1_atCD998947peroxidase-4e-2At3g21770peroxidase 30 (PER30) (P30) (PRXR9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00413Link to KaPPA-View 4Peroxidase, class III



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00360Link to KEGG PATHWAYPhenylalanine metabolism
00680Link to KEGG PATHWAYMethane metabolism
00940Link to KEGG PATHWAYPhenylpropanoid biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01100Link to KEGG PATHWAYMetabolic pathways
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