Gene omics information

Query gene ID At3g21520
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3948.4At3g21520821706unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7888.6At3g44350823560anac061 (Arabidopsis NAC domain containing protein 61)F:transcription factor activity;P:multicellular organismal development, response to chitin, regulation of transcription;C:cellular_component unknown;PS.X.H.G.
0.7888.6At5g24540832525BGLU31 (BETA GLUCOSIDASE 31)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFAS.X.H.G.
0.7184.2At3g28890822523AtRLP43 (Receptor Like Protein 43)F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAVS.X.H.G.
0.6781.6At1g61490842443S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAS.X.H.G.
0.5267.4At2g36440818218unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4457.2At2g40740818669WRKY55member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.2830.3At4g38530830010ATPLC1 (ARABIDOPSIS THALIANA PHOSPHOLIPASE C 1)Encodes a putative phosphoinositide-specific phospholipase C. There are two genes called ATPLC1, one corresponding to AT4g38530 (this one) and one corresponding to AT5g58670.S.X.H.G.
0.2726.2At5g37490833727U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBVS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
450.6100.0GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
222.2100.0GSM131305AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
149.399.9GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutants
148.199.9GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutants
140.299.9GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutants
129.099.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
128.299.9GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutants
119.999.9GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.018e-238At3g28770822509unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOBFPVAC.G.S.X.
0.033e-136At3g02430821304unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.011e+034At5g11180830988ATGLR2.6member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.021e+034At3g28570822487AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAVC.G.S.X.
0.021e+034At2g48120819424PAC (PALE CRESS)The pale cress (pac) mutant affects chloroplast and leaf development; mutants are ABA-deficient and accumulate lower levels of carotenoids and chlorophyll compared to wild type. PAC is probably involved in chloroplast mRNA maturation. Three alternative transcripts of this gene exist.C.G.S.X.
0.021e+034At1g25450839131KCS5 (3-KETOACYL-COA SYNTHASE 5)Encodes KCS5, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.015e+032At5g57320835837villin, putativeF:actin binding;P:cytoskeleton organization;C:cellular_component unknown;MOPFBC.G.S.X.
0.025e+032At4g03100828092rac GTPase activating protein, putativeF:Rac GTPase activator activity;P:signal transduction;C:intracellular;MOFPC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxGmaAffx.73570.1.S1_atBG316320--4e-22At1g01120KCS1 (3-KETOACYL-COA SYNTHASE 1)C.G.S.X.
0.036e-134Hordeum vulgareContig8507_atContig8507--2e-43At3g03120ATARFB1C (ADP-ribosylation factor B1C)C.G.S.X.
0.049e+032Oryza sativaOsAffx.4860.1.S1_at---0C.G.S.X.
0.037e+032Populus trichocarpaPtpAffx.222984.1.S1_atpmrna40738hypothetical protein-1e+0At1g6743060S ribosomal protein L17 (RPL17B)C.G.S.X.
0.041e+034Triticum aestivumTaAffx.39447.1.A1_atBG905225--5e-2At4g22640-C.G.S.X.
0.031e+032Vitis vinifera1610722_atBQ797980hypothetical protein LOC100255644-7e-2At1g58122CPuORF45 (Conserved peptide upstream open reading frame 45)C.G.S.X.
0.032e+032Zea maysZmAffx.1351.1.S1_at40794996-43--2e+0At3g21520unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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