Gene omics information

Query gene ID At3g21420
Gene name oxidoreductase, 2OG-Fe(II) oxygenase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At3g21420821696oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:metabolic process;C:cellular_component unknown;POBFMS.X.H.G.
0.6781.6At5g17980831665C2 domain-containing proteinF:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;MOBFPVAS.X.H.G.
0.5368.6At5g47920834843unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.4050.8At4g16790827385hydroxyproline-rich glycoprotein family proteinF:unknown;P:unknown;C:unknown;MPFOBVAS.X.H.G.
0.3541.6At5g24800832549BZIP9 (BASIC LEUCINE ZIPPER 9)Encodes bZIP protein BZO2H2.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
442.7100.0GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
192.2100.0GSM311294Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
162.699.9GSM311293Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
126.799.9GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
123.099.9GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
111.599.9GSM284396Arabidopsis GPSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
74.399.9GSM106967opr3_OPDA_22 hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
71.699.9GSM134206Murray_3-3_D5-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
63.599.8GSM106969opr3_OPDA_22 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
55.799.8GSM184524Stele root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.029e-342At3g50690824233leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.019e-342At1g79640844303ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAC.G.S.X.
0.034e-240At5g63590836478FLS3 (FLAVONOL SYNTHASE 3)F:flavonol synthase activity;P:response to light stimulus, response to sucrose stimulus, flavonoid biosynthetic process;C:cellular_component unknown;POBFMC.G.S.X.
0.014e-240At4g38600830017KAK (KAKTUS)encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.C.G.S.X.
0.024e-240At3g06440819820galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;MPOFC.G.S.X.
0.074e-240At1g17020838272SRG1 (SENESCENCE-RELATED GENE 1)Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.C.G.S.X.
0.014e-240At1g544408418863'-5' exonuclease/ nucleic acid bindingF:3'-5' exonuclease activity, nucleic acid binding;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:intracellular;BOMFPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.271e-1171Glycine maxGma.10150.1.A1_atAW277321--9e-12At3g21420oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.031e+034Hordeum vulgareHVSMEh0101N10f_atHVSMEh0101N10f--3e-1At2g04066MATE efflux protein-relatedC.G.S.X.
0.083e-138Oryza sativaOs01g0935400NM_190055.1-2OG-Fe(II) oxygenase domain containing protein1e-1At3g21420oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.269e-1375Populus trichocarpaPtpAffx.208550.1.S1_atpmrna16966hypothetical protein-2e-12At3g21420oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.046e-446Triticum aestivumTa.25606.1.A1_atCD453711--8e-2At1g49390oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.051e-240Vitis vinifera1613961_atCF404551hypothetical protein LOC100253700-7e-5At1g120101-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeC.G.S.X.
0.029e-134Zea maysZm.17956.1.A1_atCF637428--2e+0At3g20570plastocyanin-like domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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