Gene omics information

Query gene ID At3g21140
Gene name FMN binding
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g21140821666FMN bindingF:FMN binding;P:unknown;C:chloroplast;BOPMS.X.H.G.
0.5267.4At1g56350842089peptide chain release factor, putativeF:translation release factor activity, codon specific, translation release factor activity;P:translational termination;C:cytoplasm;OBMFPVS.X.H.G.
0.4558.3At3g12990820485RRP45a (Ribonuclease PH45a)Encodes a 3'-5' exoribonuclease, partially redundant with CER7. Involved in epicuticular wax biosynthesis.S.X.H.G.
0.4457.2At4g15570827233MAA3 (MAGATAMA 3)Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development.S.X.H.G.
0.4355.3At2g31240817681tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MBOFPAVS.X.H.G.
0.4253.9At1g73240843658unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.3948.4At3g069403768779transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.3846.7At5g64730836594transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:unknown;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFOBPAVS.X.H.G.
0.3846.7At2g31740817731methyltransferaseF:methyltransferase activity;P:metabolic process;C:unknown;OBMPFAS.X.H.G.
0.3643.6At1g52380841668Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing proteinF:molecular_function unknown;P:intracellular transport;C:cytosol, nucleus;MFOPBVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
51.999.8GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
45.399.8GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
41.699.8GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.299.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.099.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
32.799.7GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
31.099.7GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
29.399.7GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.399.7GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.599.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.630690At1g51560841581FMN bindingF:FMN binding;P:unknown;C:chloroplast;BOPMC.G.S.X.
0.011e-138At2g40430818636-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBC.G.S.X.
0.016e-136At4g34520829603KCS18Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.016e-136At3g03380821268DegP7 (DegP protease 7)Encodes a putative DegP protease.C.G.S.X.
0.016e-136At3g02330821115pentatricopeptide (PPR) repeat-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;POMFBAC.G.S.X.
0.012e+034At5g62190836340PRH75DEAD/DEAH box RNA helicase PRH75C.G.S.X.
0.012e+034At4g33160829453ubiquitin-protein ligaseF:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;PC.G.S.X.
0.012e+034At2g39220818507PLP6 (PATATIN-LIKE PROTEIN 6)F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:unknown;PBOMFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.261e-21105Glycine maxGma.8088.1.S1_atBM178311--9e-30At1g51560FMN bindingC.G.S.X.
0.168e-1477Hordeum vulgareContig7745_atContig7745--2e-13At3g21140FMN bindingC.G.S.X.
0.414e-37157Oryza sativaOs08g0517500NM_189026.1-Pyridoxamine 5'-phosphate oxidase-related domaincontaining protein7e-34At1g51560FMN bindingC.G.S.X.
0.435e-36153Populus trichocarpaPtpAffx.39611.1.A1_atCV254673hypothetical protein-3e-36At3g21140FMN bindingC.G.S.X.
0.277e-1065Triticum aestivumTa.2689.1.S1_atCD879309--1e-9At3g21140FMN bindingC.G.S.X.
0.233e-1891Vitis vinifera1619155_atCF213888--7e-18At3g21140FMN bindingC.G.S.X.
0.141e-963Zea maysZm.14996.1.S1_atCK985437pyridoxamine 5-phosphate oxidase family protein-2e-12At1g51560FMN bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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