Gene omics information

Query gene ID At3g20410
Gene name CPK9 (calmodulin-domain protein kinase 9)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.135.8At3g20410821586CPK9 (calmodulin-domain protein kinase 9)calmodulin-domain protein kinase CDPK isoform 9 (CPK9)S.X.H.G.
0.5570.6At1g09970837531LRR XI-23F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid autophosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.4050.8At4g23270828426protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.4050.8At5g11670831039ATNADP-ME2 (NADP-malic enzyme 2)The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis.S.X.H.G.
0.3541.6At2g02220814753PSKR1 (PHYTOSULFOKIN RECEPTOR 1)Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.399.7GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
19.599.6E-TABM-63-raw-cel-681137195
18.599.5GSM322548genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
18.399.5GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
17.599.5E-NASC-76-raw-cel-1359878976
16.899.5GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
16.799.5GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
16.299.5GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
15.299.4GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
15.199.4GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7401346At1g50700841492CPK33member of Calcium Dependent Protein KinaseC.G.S.X.
0.411e-61238At4g04720825807CPK21member of Calcium Dependent Protein KinaseC.G.S.X.
0.398e-38159At4g21940828283CPK15member of Calcium Dependent Protein KinaseC.G.S.X.
0.111e-21105At5g12180831091CPK17member of Calcium Dependent Protein KinaseC.G.S.X.
0.124e-21103At3g57530824920CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitroC.G.S.X.
0.154e-1583At4g04695825804CPK31member of Calcium Dependent Protein Kinase. Involved in response to salicylic acid.C.G.S.X.
0.132e-1377At5g19360832056CPK34member of Calcium Dependent Protein KinaseC.G.S.X.
0.084e-1273At2g41860818786CPK14member of Calcium Dependent Protein KinaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.412e-57224Glycine maxGma.8111.1.S1_atU69174.1calmodulin-like domain protein kinase isoenzyme gamma-3e-57At3g20410CPK9 (calmodulin-domain protein kinase 9)C.G.S.X.
0.278e-21101Hordeum vulgareContig5679_atContig5679--7e-42At4g21940CPK15C.G.S.X.
0.314e-26121Oryza sativaOs07g0515100AK074028.1-Calcium-dependent protein kinase, isoform 2 (EC2.7.1.-) (CDPK 2)2e-32At1g50700CPK33C.G.S.X.
0.273e-32141Populus trichocarpaPtpAffx.203676.1.S1_atpmrna7282calcium dependent protein kinase 15-1e-51At4g04720CPK21C.G.S.X.
0.112e-23111Triticum aestivumTa.2423.1.S1_atBT009467.1Calcium-dependent protein kinase-3e-23At3g20410CPK9 (calmodulin-domain protein kinase 9)C.G.S.X.
0.211e-963Vitis vinifera1610931_atCF206616.1--2e-9At3g20410CPK9 (calmodulin-domain protein kinase 9)C.G.S.X.
0.291e-25117Zea maysZm.221.1.A1_atU28376.1calcium-dependent protein kinase-4e-25At3g20410CPK9 (calmodulin-domain protein kinase 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
CGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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