CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g20130

Gene name CYP705A22

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.32 35.7 At3g20130 821556 CYP705A22 member of CYP705A S.X. H.G.
0.92 96.0 At3g50640 824227 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.83 91.4 At5g15150 831367 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem. S.X. H.G.
0.80 89.8 At3g01220 821232 ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein, its expression is auxin-inducible and dependent on MP gene activity. S.X. H.G.
0.80 89.8 At3g54770 824642 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:cellular_component unknown;MPFOB S.X. H.G.
0.73 85.5 At4g28650 828983 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.53 68.6 At5g19340 832054 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFBV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
127.9 99.9 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
114.2 99.9 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
107.5 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
105.5 99.9 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
103.8 99.9 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
100.7 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
97.3 99.9 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
93.0 99.9 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
88.1 99.9 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
79.9 99.9 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.53 2e-128 460 At3g20090 821552 CYP705A18 member of CYP705A C.G. S.X.
0.59 9e-121 434 At3g20120 821555 CYP705A21 member of CYP705A C.G. S.X.
0.58 2e-115 416 At3g20960 821646 CYP705A33 member of CYP705A C.G. S.X.
0.64 7e-103 375 At2g05180 815066 CYP705A6 member of CYP705A C.G. S.X.
0.52 4e-98 359 At3g20100 821553 CYP705A19 member of CYP705A C.G. S.X.
0.57 6e-91 335 At3g20080 821548 CYP705A15 member of CYP705A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-2 40 Glycine max GmaAffx.82148.1.S1_at BI471212 - - 1e-2 At3g20130 CYP705A22 C.G. S.X.
0.02 1e-1 38 Hordeum vulgare Contig17311_at Contig17311 - - 4e-1 At3g20120 CYP705A21 C.G. S.X.
0.02 4e-4 48 Oryza sativa Os02g0570500 AK107418.1 - Cytochrome P450 family protein 2e-4 At3g20130 CYP705A22 C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.222723.1.S1_at pmrna40322 hypothetical protein - 1e-4 At2g38050 DET2 (DE-ETIOLATED 2) C.G. S.X.
0.02 8e-1 36 Triticum aestivum TaAffx.4773.1.S1_at CA732389 - - 3e-1 At1g42480 unknown protein C.G. S.X.
0.02 1e-2 40 Vitis vinifera 1614070_at CF214262 hypothetical protein LOC100247788 - 4e-3 At3g14630 CYP72A9 C.G. S.X.
0.02 2e-2 40 Zea mays Zm.7010.3.S1_at AI691447 - - 5e-2 At2g32100 OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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