CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g20090

Gene name CYP705A18

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.43 55.3 At3g20090 821552 CYP705A18 member of CYP705A S.X. H.G.
0.50 65.3 At4g23510 828451 disease resistance protein (TIR class), putative F:transmembrane receptor activity;P:defense response signaling pathway, resistance gene-dependent, signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBO S.X. H.G.
0.44 57.2 At1g50520 841474 CYP705A27 member of CYP705A S.X. H.G.
0.40 50.8 At2g21850 816721 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOF S.X. H.G.
0.36 43.6 At1g12160 837768 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
236.6 100.0 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
134.0 99.9 GSM184497 Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
112.2 99.9 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
105.1 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
75.5 99.9 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
66.0 99.8 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
62.0 99.8 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
58.7 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
57.0 99.8 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
47.5 99.8 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.79 0 924 At3g20960 821646 CYP705A33 member of CYP705A C.G. S.X.
0.78 0 716 At4g15360 827202 CYP705A3 member of CYP705A C.G. S.X.
0.59 0 674 At2g05180 815066 CYP705A6 member of CYP705A C.G. S.X.
0.53 1e-128 460 At3g20130 821556 CYP705A22 member of CYP705A C.G. S.X.
0.60 7e-90 331 At3g20120 821555 CYP705A21 member of CYP705A C.G. S.X.
0.49 7e-87 321 At3g20110 821554 CYP705A20 member of CYP705A C.G. S.X.
0.40 1e-78 293 At2g14100 815896 CYP705A13 a member of the cytochrome P450 family C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-3 44 Glycine max GmaAffx.84302.1.S1_at AW101163 - - 2e-3 At4g15360 CYP705A3 C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig18021_at Contig18021 - - 9e-5 At1g77550 protein binding / tubulin-tyrosine ligase C.G. S.X.
0.02 2e-2 42 Oryza sativa Os02g0529800 9630.m03109 - Cytochrome P450 family protein 3e-3 At2g24180 CYP71B6 (CYTOCHROME P450 71B6) C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.225504.1.S1_at pmrna44895 - - 3e-3 At3g48310 CYP71A22 C.G. S.X.
0.03 4e-2 40 Triticum aestivum Ta.8262.1.S1_at BQ161667 - - 4e-1 At4g13770 CYP83A1 (CYTOCHROME P450 83A1) C.G. S.X.
0.03 7e-1 34 Vitis vinifera 1610300_at CF518694 - - 9e-7 At3g23200 unknown protein C.G. S.X.
0.02 4e+0 32 Zea mays Zm.6246.2.A1_at AI677558 - - 9e-7 At2g22080 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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