Gene omics information

Query gene ID At3g19100
Gene name calcium-dependent protein kinase, putative / CDPK, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g19100821445calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MOPFBVAS.X.H.G.
0.5368.6At3g03380821268DegP7 (DegP protease 7)Encodes a putative DegP protease.S.X.H.G.
0.5368.6At1g71010843440phosphatidylinositol-4-phosphate 5-kinase family proteinF:1-phosphatidylinositol-4-phosphate 5-kinase activity, protein binding, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process, cellular protein metabolic process;C:cellular_component unknown;MOFPABS.X.H.G.
0.4659.8At1g15750838144TPL (TOPLESS)Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.S.X.H.G.
0.4659.8At5g03280831889EIN2 (ETHYLENE INSENSITIVE 2)Involved in ethylene signal transduction. Acts downstream of CTR1. Positively regulates ORE1 and negatively regulates mir164A,B,C to regulate leaf senescence.S.X.H.G.
0.4558.3At1g08680837390ZIGA4 (ARF GAP-like zinc finger-containing protein ZiGA4)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15.S.X.H.G.
0.4457.2At4g00660828042DEAD/DEAH box helicase, putativeF:helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:unknown;C:unknown;BOMFPAVS.X.H.G.
0.4457.2At3g13290820529VCR (VARICOSE-RELATED)F:nucleotide binding;P:unknown;C:cellular_component unknown;MBOFPAS.X.H.G.
0.4355.3At3g50590824223nucleotide bindingF:nucleotide binding;P:biological_process unknown;C:plasma membrane;MBFOPVS.X.H.G.
0.4253.9At2g15240816013UNC-50 family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MFPOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.599.6GSM179961Arabidopsis roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
16.299.5GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
15.699.5GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
14.999.4E-MEXP-475-raw-cel-680982521
14.899.4GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
14.599.4GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
12.999.3E-MEXP-475-raw-cel-680982449
12.899.3GSM142592DB001_ATH1_A2-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cells
12.399.3GSM131299AtGen_6-2511_Osmoticstress-Shoots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
12.299.3GSM179970Arabidopsis aux1 mutant roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7801069At1g49580841382calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MOPFBVAC.G.S.X.
0.188e-26119At3g50530824217CRK (CDPK-related kinase)CDPK-related kinaseC.G.S.X.
0.147e-1479At2g46700819282calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:unknown;MOPFBVAC.G.S.X.
0.143e-1067At3g56760824843calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane, membrane;MOPFBVAC.G.S.X.
0.224e-963At2g41140818713CRK1 (CDPK-RELATED KINASE 1)Encodes CDPK-related kinase 1 (CRK1).C.G.S.X.
0.112e-757At3g49370824099calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:N-terminal protein myristoylation;C:plasma membrane;MOPFBVAC.G.S.X.
0.031e-242At2g31500817708CPK24member of Calcium Dependent Protein KinaseC.G.S.X.
0.036e-240At1g76040843936CPK29member of Calcium Dependent Protein KinaseC.G.S.X.
0.016e-240At1g49380841361cytochrome c biogenesis protein familyF:molecular_function unknown;P:cytochrome complex assembly;C:chloroplast;BOPMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.329e-45182Glycine maxGma.17975.2.S1_atBQ628976--2e-29At3g50530CRK (CDPK-related kinase)C.G.S.X.
0.055e-756Hordeum vulgareContig16466_atContig16466--4e-15At2g46700calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.166e-22107Oryza sativaOsAffx.28904.1.S1_at---0C.G.S.X.
0.202e-20101Populus trichocarpaPtpAffx.35223.1.S1_s_atDN500149hypothetical protein-2e-67At2g41140CRK1 (CDPK-RELATED KINASE 1)C.G.S.X.
0.143e-448Triticum aestivumTa.21200.1.S1_x_atBT009309.1--2e-4At3g19100calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.078e-1167Vitis vinifera1610570_atCA807939hypothetical protein LOC100246879-2e-24At5g24430calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.184e-1065Zea maysZm.19037.1.S1_atCA404446--1e-30At3g50530CRK (CDPK-related kinase)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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