Gene omics information

Query gene ID At3g18350
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2930.3At3g18350821364unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At4g00590827968asparaginase 2 family proteinF:hydrolase activity;P:unknown;C:unknown;BOMFPAS.X.H.G.
0.5773.8At5g05310830413unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPS.X.H.G.
0.4457.2At5g45370834573nodulin-related / integral membrane family proteinF:unknown;P:unknown;C:membrane;BOPAMFS.X.H.G.
0.3338.1At5g04270830306zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:endomembrane system;MOFPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
63.599.8GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
45.999.8GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
26.799.7GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
24.199.6GSM133778Lindsey_1-2_globular-apical_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
16.799.5GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.599.5GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
15.099.4GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
14.699.4GSM133776Lindsey_1-1_globular-apical_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
14.399.4GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.899.4GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.700745At1g48840841306unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.017e-240At5g25800832649exonuclease family proteinF:exonuclease activity, nucleic acid binding;P:unknown;C:intracellular;MFOPBVC.G.S.X.
0.017e-240At4g30810829204scpl29 (serine carboxypeptidase-like 29)F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOBC.G.S.X.
0.017e-240At3g57750824944protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAC.G.S.X.
0.017e-240At3g29160822566AKIN11 (Arabidopsis SNF1 kinase homolog 11)encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1.C.G.S.X.
0.013e-138At4g19930827737F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POC.G.S.X.
0.013e-138At4g25410828644DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-242Glycine maxGma.17956.1.S1_atCD413054--2e-4At1g06475unknown proteinC.G.S.X.
0.028e-342Hordeum vulgareContig10915_s_atContig10915--4e-1At5g53140protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.062e-346Oryza sativaOs10g0127700AK072882.1-Protein of unknown function DUF639 family protein1e-3At3g18350unknown proteinC.G.S.X.
0.231e-1689Populus trichocarpaPtpAffx.210428.1.S1_atpmrna20480hypothetical protein-8e-17At3g18350unknown proteinC.G.S.X.
0.022e-242Triticum aestivumTa.25321.2.A1_a_atCD454365--1e+0At4g25410DNA binding / transcription factorC.G.S.X.
0.021e+034Vitis vinifera1612785_atCF515439hypothetical protein LOC100254926-6e-31At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)C.G.S.X.
0.051e-448Zea maysZm.13660.1.S1_atAY107143.1--6e-2At1g62480vacuolar calcium-binding protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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