Gene omics information

Query gene ID At3g18250
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At3g18250821353unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFOS.X.H.G.
0.5065.3At2g29350817484SAG13senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenaseS.X.H.G.
0.4457.2At1g67980843126CCoAMTEncodes S-adenosyl-L-methionine: transcaffeoyl Coenzyme A 3-O-methyltransferase.S.X.H.G.
0.3338.1At2g43570818959chitinase, putativeF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMVS.X.H.G.
0.2930.3At5g38900833882DSBA oxidoreductase family proteinF:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMAS.X.H.G.
0.2115.8At3g47480823902calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
77.199.9E-MEXP-1094-raw-cel-1379507313
60.999.8GSM269494mkk1/mkk2, no-treatment, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
55.199.8E-MEXP-1094-raw-cel-1379507273
46.899.8GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responses
41.099.8GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
39.799.8GSM133736Buchanan-Wollaston_A-8-bwoll-Ei2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
37.199.7GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responses
36.299.7E-NASC-76-raw-cel-1359878976
35.999.7GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responses
35.999.7GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.104e-444At1g682386241144unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.013e-238At4g37900829946glycine-rich proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVAC.G.S.X.
0.031e-136At5g09540830813DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding;P:protein folding, response to salt stress;C:cellular_component unknown;BPMFOAC.G.S.X.
0.011e-136At1g65440842855GTB1Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.C.G.S.X.
0.024e-134At5g64430836564octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast envelope;MPFOBVAC.G.S.X.
0.014e-134At5g04810830360pentatricopeptide (PPR) repeat-containing proteinF:nucleotide binding, nucleic acid binding;P:unknown;C:chloroplast;PMOFBVAC.G.S.X.
0.084e-134At4g15120827178VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POMFAC.G.S.X.
0.044e-134At4g09830826572-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.066e-134Glycine maxGmaAffx.26908.1.S1_atBF425834--5e-6At5g09750HEC3 (HECATE 3)C.G.S.X.
0.058e-132Hordeum vulgareHVSMEl0010I15r2_x_atHVSMEl0010I15r2--3e+0At5g60650unknown proteinC.G.S.X.
0.072e-136Oryza sativaOs07g0633100AK071223.1-Conserved hypothetical protein2e-1At5g16430-C.G.S.X.
0.096e-134Populus trichocarpaPtpAffx.10708.1.S1_atCX178949--2e-2At3g06490MYB108 (myb domain protein 108)C.G.S.X.
0.051e-136Triticum aestivumTa.28521.2.S1_atBQ606769--1e+0At3g18510unknown proteinC.G.S.X.
0.048e+028Vitis vinifera1621904_atCF568995--4e+0At5g08070TCP17 (TCP DOMAIN PROTEIN 17)C.G.S.X.
0.052e-134Zea maysZmAffx.1176.1.A1_atAW927389--8e-1At3g18250unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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