Gene omics information

Query gene ID At3g18200
Gene name nodulin MtN21 family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4253.9At3g18200821347nodulin MtN21 family proteinF:molecular_function unknown;P:unknown;C:endomembrane system, membrane;BOPAMFS.X.H.G.
0.7788.0At1g63450842651catalyticF:catalytic activity;P:unknown;C:membrane;POMS.X.H.G.
0.7184.2At4g09990826590unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBS.X.H.G.
0.6781.6At5g15890831446unknown proteinF:unknown;P:biological_process unknown;C:unknown;PMFOVBAS.X.H.G.
0.6579.6At1g53830841820ATPME2encodes a pectin methylesteraseS.X.H.G.
0.6378.1At2g47540819367pollen Ole e 1 allergen and extensin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6176.7At1g53680841805ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.6075.7At5g49270834987SHV2 (SHAVEN 2)Involved in successfully establishing tip growth in root hairs.S.X.H.G.
0.5974.7At2g45890819197ROPGEF4 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 4)Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.S.X.H.G.
0.5469.5At2g34910818056unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
252.9100.0GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis root
198.1100.0GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
191.5100.0GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
168.3100.0GSM133984Birnbaum_1-14_StageIII-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis root
133.299.9GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
123.799.9GSM184504Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
120.299.9GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
105.499.9GSM184843Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with salt
100.699.9GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
98.599.9GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.161e-1171At1g75500843886nodulin MtN21 family proteinF:unknown;P:unknown;C:plasma membrane, membrane;OBPAMC.G.S.X.
0.031e-138At2g23120816844-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
0.015e-136At1g16930838264F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.012e+034At5g04020830281calmodulin bindingF:calmodulin binding;P:biological_process unknown;C:plasma membrane;OMBPFAVC.G.S.X.
0.032e+034At5g57887835899unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.002e+034At4g38780830033splicing factor, putativeF:molecular_function unknown;P:nuclear mRNA splicing, via spliceosome;C:spliceosome;MOFPBC.G.S.X.
0.012e+034At4g36520829804heat shock protein bindingF:heat shock protein binding;P:unknown;C:unknown;MOBFPAVC.G.S.X.
0.012e+034At2g22810816812ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4)key regulatory enzyme in the biosynthesis of the plant hormone ethylene. ACS4 is specifically induced by indoleacetic acid (IAA).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-136Glycine maxGmaAffx.44857.1.A1_atBE824262--7e-1At1g11470-C.G.S.X.
0.021e+034Hordeum vulgareHB30O18r_atHB30O18r--7e-1At3g18200nodulin MtN21 family proteinC.G.S.X.
0.031e+036Oryza sativaOsAffx.24390.1.S1_at---0C.G.S.X.
0.195e-859Populus trichocarpaPtpAffx.212691.1.S1_atpmrna24816hypothetical protein-3e-8At3g18200nodulin MtN21 family proteinC.G.S.X.
0.032e-344Triticum aestivumTa.20938.2.A1_x_atCA624118--1e-3At3g18200nodulin MtN21 family proteinC.G.S.X.
0.023e+032Vitis vinifera1613396_atAY427133.1--1e+0At4g37040MAP1D (METHIONINE AMINOPEPTIDASE 1D)C.G.S.X.
0.031e-344Zea maysZm.3158.1.S1_atBU093720hypothetical protein LOC100279417-7e-11At1g75500nodulin MtN21 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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