Gene omics information

Query gene ID At3g18165
Gene name MOS4 (Modifier of snc1,4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4862.5At3g18165821343MOS4 (Modifier of snc1,4)Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.S.X.H.G.
0.6075.7At3g18640821395zinc finger protein-relatedF:zinc ion binding, nucleic acid binding;P:unknown;C:unknown;MOFPVBAS.X.H.G.
0.5974.7At2g19480816467NAP1This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.S.X.H.G.
0.5773.8At3g18790821412-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVAS.X.H.G.
0.5570.6At5g06160830503ATO (ATROPOS)Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.S.X.H.G.
0.4457.2At5g53000835379TAP46 (2A phosphatase associated protein of 46 kD)PP2A-associated protein with a possible function in the chilling responseS.X.H.G.
0.4253.9At1g48900841312signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C)F:7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding;P:SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;BOAMFPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
47.599.8GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
43.399.8GSM284391Arabidopsis GPE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
35.999.7GSM311274Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
33.699.7GSM311273Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
27.999.7GSM284384Arabidopsis GEP5GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
23.799.6GSM311292Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
21.999.6GSM284385Arabidopsis GEP6GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
20.899.6GSM284397Arabidopsis GGSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
17.199.5GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
16.899.5GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.031e-138At4g26070828713MEK1 (MAP KINASE/ ERK KINASE 1)Member of MAP Kinase Kinase. Likely functions in a stress-activated MAPK pathway. Can phosphorylate the MAPK AtMPK4, in response to stress. Gets phosphorylated by MEKK1 in response to wounding.C.G.S.X.
0.024e-136At5g38480833836GRF3 (GENERAL REGULATORY FACTOR 3)general regulatory factor, a 14-3-3 geneC.G.S.X.
0.012e+034At4g33210829457F-box family protein (FBL15)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:unknown;MPOFBVC.G.S.X.
0.022e+034At4g25170828620-F:molecular_function unknown;P:biological_process unknown;C:unknown;PMBFOC.G.S.X.
0.012e+034At4g30825829206pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:cell cycle;C:nucleus;POMFBAC.G.S.X.
0.012e+034At4g09680826554unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.144e-859Glycine maxGma.16354.2.S1_s_atCD393041--3e-8At3g18165MOS4 (Modifier of snc1,4)C.G.S.X.
0.063e-342Hordeum vulgareContig11455_atContig11455--1e-2At3g18165MOS4 (Modifier of snc1,4)C.G.S.X.
0.092e-757Oryza sativaOs01g0264800AK059509.1-Breast carcinoma amplified sequence 2 familyprotein2e-1At5g53680RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.071e-138Populus trichocarpaPtpAffx.58266.1.S1_atCV260540hypothetical protein-1e-1At3g18165MOS4 (Modifier of snc1,4)C.G.S.X.
0.046e-342Triticum aestivumTaAffx.59588.2.S1_atCA609866--4e-3At3g18165MOS4 (Modifier of snc1,4)C.G.S.X.
0.072e-342Vitis vinifera1606592_atCB922083hypothetical protein LOC100254130-8e-3At3g18165MOS4 (Modifier of snc1,4)C.G.S.X.
0.036e-134Zea maysZm.18030.1.A1_atBG842768hypothetical protein LOC100275804-1e+0At3g18165MOS4 (Modifier of snc1,4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009870A series of molecular signals that depends upon R-genes and is activated during defense response.
XGO:0010204A series of molecular signals that is activated during defense response and does not depend upon R-genes.
XGO:0042742Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
XGO:0050832Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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