Gene omics information

Query gene ID At3g17750
Gene name protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At3g17750821043protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MOPFBVAS.X.H.G.
0.6075.7At4g15415827211ATB' GAMMAB' regulatory subunit of PP2A (AtB'gamma)S.X.H.G.
0.5368.6At3g55480824714adaptin family proteinF:protein binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system;BMFOPS.X.H.G.
0.4659.8At5g21040832228FBX2 (F-BOX PROTEIN 2)Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.S.X.H.G.
0.4253.9At5g46190834661KH domain-containing proteinF:RNA binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBS.X.H.G.
0.3338.1At5g02850831762hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.899.5GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
15.099.4GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.599.3GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.699.2GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
9.699.1GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
9.499.1GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.399.1GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
8.799.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
8.399.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
8.299.0GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.263e-144513At1g73450843680protein kinase, putativeF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MOPFBVAC.G.S.X.
0.301e-143511At1g73460843681protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol, plasma membrane, cytoplasm;MOPFBVAC.G.S.X.
0.095e-757At2g40120818603protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytoplasm;MOPFBVAC.G.S.X.
0.031e-450At4g03175828048protein kinase family proteinF:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPVBC.G.S.X.
0.017e-344At4g35500829702protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.013e-242At5g19500832070tryptophan/tyrosine permease family proteinF:amine transmembrane transporter activity;P:amino acid transport;C:membrane;BOPAMFC.G.S.X.
0.013e-242At1g02580839422MEA (MEDEA)Encodes a putative transcription factor MEDEA (MEA) that negatively regulates seed development in the absence of fertilization. Mutations in this locus result in embryo lethality. MEA is a Polycomb group gene that is imprinted in the endosperm. The maternal allele is expressed and the paternal allele is silent. MEA is controlled by DEMETER (DME), a DNA glycosylase required to activate MEA expression, and METHYLTRANSFERASE I (MET1), which maintains CG methylation at the MEA locus. MEA is involved in the negative regulation of its own imprinted gene expression; the effect is not only allele-specific but also dynamically regulated during seed development. In the ovule, the MEA transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilizationC.G.S.X.
0.011e-140At5g03800831717EMB175 (EMBRYO DEFECTIVE 175)Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.196e-72274Glycine maxGmaAffx.33649.2.S1_atAW234719--1e-83At1g73450protein kinase, putativeC.G.S.X.
0.158e-32139Hordeum vulgareContig10955_atContig10955--5e-32At3g17750protein kinase family proteinC.G.S.X.
0.212e-87325Oryza sativaOs03g0719500AK106321.1-Ser-Thr protein kinase-like protein8e-99At1g73450protein kinase, putativeC.G.S.X.
0.258e-136486Populus trichocarpaPtpAffx.215381.1.S1_s_atpmrna29536hypothetical protein-9e-114At1g73460protein kinase family proteinC.G.S.X.
0.025e-448Triticum aestivumTa.29633.1.S1_atCK209176--1e-4At3g17750protein kinase family proteinC.G.S.X.
0.021e-757Vitis vinifera1608346_atCF510726hypothetical protein LOC100255903-1e-22At1g73450protein kinase, putativeC.G.S.X.
0.012e-448Zea maysZm.4708.1.A1_atAI738326CAK1AT-6e-4At4g28980cyclin-dependent kinase-activating kinase 1At / CDK-activating kinase 1At (CAK1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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