Gene omics information

Query gene ID At3g16800
Gene name protein phosphatase 2C, putative / PP2C, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2014.4At3g16800820933protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, cytoplasm;PMOFVS.X.H.G.
0.2522.6At3g49760824138AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFS.X.H.G.
0.2014.4At3g50970824261LTI30 (LOW TEMPERATURE-INDUCED 30)Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid.S.X.H.G.
0.1912.7At3g24520822047AT-HSFC1member of Heat Stress Transcription Factor (Hsf) familyS.X.H.G.
0.082.3At5g05790830464myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
255.1100.0GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
144.799.9GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
116.899.9GSM131280AtGen_6-1612_Cold(4°C)-Shoots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
116.799.9GSM131279AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
95.299.9GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
81.199.9GSM131278AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
77.099.9GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
74.099.9GSM131290AtGen_6-2222_Osmoticstress-Roots-1.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
68.599.9GSM74900Wildtype_24H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
62.499.8GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.094e-1169At5g27930832860protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:cellular_component unknown;PMOFVBC.G.S.X.
0.124e-1169At3g05640819731protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation;C:cellular_component unknown;PMOFVC.G.S.X.
0.025e-136At5g36250833622protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:N-terminal protein myristoylation;C:nucleus;PMOFVBC.G.S.X.
0.015e-136At2g28520817400VHA-A1 (VACUOLAR PROTON ATPASE A 1)Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network.C.G.S.X.
0.015e-136At2g24130816947leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.098e-756Glycine maxGmaAffx.75245.1.S1_atAI737035--2e-11At5g27930protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.024e+032Hordeum vulgareHV_CEb0012P03f_atHV_CEb0012P03f--3e+0At5g17390universal stress protein (USP) family proteinC.G.S.X.
0.024e+034Oryza sativaOs08g03435009636.m02500--9e-1At5g39310ATEXPA24 (ARABIDOPSIS THALIANA EXPANSIN A24)C.G.S.X.
0.123e-1273Populus trichocarpaPtpAffx.208451.1.S1_atpmrna16790hypothetical protein-2e-9At3g05640protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.032e+034Triticum aestivumTa.26393.1.A1_atCD490643--6e+0At4g10695unknown proteinC.G.S.X.
0.031e-240Vitis vinifera1615821_atCA818800hypothetical protein LOC100252905-1e-31At4g09350DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.036e-238Zea maysZm.978.1.A1_atCF627012--1e-1At3g16800protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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