Gene omics information

Query gene ID At3g16660
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g16660820918unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMOS.X.H.G.
0.5773.8At3g16670820919unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;PS.X.H.G.
0.082.3At3g05730819742-Encodes a defensin-like (DEFL) family protein.S.X.H.G.
0.040.9At3g52340824399SPP2 (SUCROSE-6F-PHOSPHATE PHOSPHOHYDROLASE 2)sucrose-phosphatase (SPP2)S.X.H.G.
0.010.2At5g04230830302PAL3 (PHENYL ALANINE AMMONIA-LYASE 3)Member of Phenylalanine ammonialyase (PAL) gene family.Differs significantly from PAL1 and PAL2 and other sequenced plant PAL genesS.X.H.G.
0.000.0At3g26710822283CCB1 (COFACTOR ASSEMBLY OF COMPLEX C)F:molecular_function unknown;P:cytochrome b6f complex assembly;C:chloroplast;OBPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
853.4100.0E-MEXP-809-raw-cel-1123684158
386.9100.0E-MEXP-809-raw-cel-1123684141
52.399.8GSM133253RIKEN-GODA11A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
38.399.8GSM133266RIKEN-GODA4B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
35.699.7GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
30.199.7GSM133261RIKEN-GODA2A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
29.599.7GSM133279RIKEN-GODA2A-MGSE5697AtGenExpress: Comparison of plant hormone-related mutants
29.499.7GSM133263RIKEN-GODA3A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
28.099.7GSM133259RIKEN-GODA1A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
27.899.7GSM133270RIKEN-GODA6B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.401e-1583At3g16670820919unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;PC.G.S.X.
0.037e-238At4g30260829149integral membrane Yip1 family proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MFPOBVC.G.S.X.
0.017e-238At2g21440816683RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MOFPBAVC.G.S.X.
0.023e-136At5g17160831580unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPVAC.G.S.X.
0.023e-136At4g17950827520DNA-binding family proteinF:DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;OMFPBVC.G.S.X.
0.011e+034At3g28415822471P-glycoprotein, putativeF:ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:transport;C:plasma membrane, membrane;BOMAFPVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e+032Glycine maxHgAffx.17245.2.A1_atCK348889--3e+0At1g20875unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareHVSMEb0012A18r2_s_atHVSMEb0012A18r2--5e-9At3g06050PRXIIF (PEROXIREDOXIN IIF)C.G.S.X.
0.031e-138Oryza sativaOsAffx.26012.1.S1_at---0C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.200414.1.S1_atpmrna838--6e-1At3g16660unknown proteinC.G.S.X.
0.032e+130Triticum aestivumTaAffx.65832.1.A1_atBJ219390--3e+0At5g44270-C.G.S.X.
0.031e+032Vitis vinifera1622006_atCF519018hypothetical protein LOC100245246-4e-3At1g33780unknown proteinC.G.S.X.
0.032e+032Zea maysZm.5727.2.A1_atBG842207--5e+0At3g16660unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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