Gene omics information

Query gene ID At3g15670
Gene name late embryogenesis abundant protein, putative / LEA protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g15670820810late embryogenesis abundant protein, putative / LEA protein, putativeF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:nucleus;BOMPFVAS.X.H.G.
0.9195.6At2g21490816688LEA (DEHYDRIN LEA)F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMFOBVS.X.H.G.
0.9195.6At4g16160827308mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinHomologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco.S.X.H.G.
0.9195.6At1g54870841926binding / catalytic/ oxidoreductaseF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:chloroplast;BOMFPAVS.X.H.G.
0.8994.6At1g73190843653TIP3Moves to the Protein Storage Vacuole in a Golgi independent mannerS.X.H.G.
0.8793.5At2g25890817130glycine-rich protein / oleosinF:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PBS.X.H.G.
0.8793.5At1g48130841231ATPER1encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought.S.X.H.G.
0.8793.5At5g54740835563protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding, nutrient reservoir activity;P:lipid transport, pollen development;C:endomembrane system;POS.X.H.G.
0.8693.1At5g01300830983phosphatidylethanolamine-binding family proteinF:phosphatidylethanolamine binding;P:biological_process unknown;C:cellular_component unknown;BOAPFS.X.H.G.
0.8693.1At5g22470832308NAD+ ADP-ribosyltransferaseF:NAD+ ADP-ribosyltransferase activity;P:protein amino acid ADP-ribosylation;C:intracellular, nucleus;MOPFBVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
264.5100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
240.5100.0GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
230.3100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
223.7100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
209.8100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
201.3100.0GSM153927ahg1-1 rep2GSE6638Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
196.6100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
191.2100.0GSM153925ABA control rep2GSE6638Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA
189.3100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
185.1100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.217e-21101At1g52690841701late embryogenesis abundant protein, putative / LEA protein, putativeF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PBMOFVAC.G.S.X.
0.048e-238At4g02465827982unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownC.G.S.X.
0.013e-136At3g56150824781EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3C)member of eIF3c - eukaryotic initiation factor 3cC.G.S.X.
0.011e+034At5g14850831337mannosyltransferase, putativeF:mannosyltransferase activity, transferase activity, transferring glycosyl groups;P:GPI anchor biosynthetic process, GPI anchor metabolic process;C:endoplasmic reticulum membrane, intrinsic to endoplasmic reticulum membrane;MFOPBC.G.S.X.
0.011e+034At4g20840827832FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:apoplast, plasma membrane;FBPOAMC.G.S.X.
0.021e+034At4g25420828645GA20OX1Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.C.G.S.X.
0.011e+034At3g21720821726ICL (ISOCITRATE LYASE)Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).C.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Glycine maxGmaAffx.43506.1.S1_atAW099277--1e-12At2g32600hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.036e-134Hordeum vulgareS0000800150H08F1_x_atS0000800150H08F1--9e-10At5g3553040S ribosomal protein S3 (RPS3C)C.G.S.X.
0.044e-240Oryza sativaOs11g05918009639.m03440-Wound-induced protein WIN2 precursor4e-9At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.043e-240Populus trichocarpaPtp.3881.1.S1_a_atBU861405hypothetical protein-6e-12At5g53820unknown proteinC.G.S.X.
0.031e+034Triticum aestivumTaAffx.42794.1.A1_atBQ169193--1e+0At3g15670late embryogenesis abundant protein, putative / LEA protein, putativeC.G.S.X.
0.032e+032Vitis vinifera1618609_s_atBQ800563hypothetical protein LOC100249094-1e+0At4g28556RIC7C.G.S.X.
0.036e-134Zea maysZm.3200.2.A1_atBG842715hypothetical protein LOC100279839-8e-5At1g74320choline kinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009793The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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