Gene omics information

Query gene ID At3g15540
Gene name IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2624.4At3g15540820793IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19)IAA induced protein 19S.X.H.G.
0.7586.9At1g15580838128IAA5 (INDOLE-3-ACETIC ACID INDUCIBLE 5)auxin induced proteinS.X.H.G.
0.6781.6At2g23170816849GH3.3encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.S.X.H.G.
0.4457.2At1g29490839826auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PS.X.H.G.
0.4050.8At1g59500842240GH3.4encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
212.6100.0E-MEXP-715-raw-cel-1121836221
204.3100.0E-MEXP-715-raw-cel-1121836247
190.4100.0GSM75514Col-0 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
183.3100.0GSM75510Col-0 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
162.599.9E-MEXP-715-raw-cel-1121836113
134.899.9E-MEXP-715-raw-cel-1121836361
109.399.9E-MEXP-715-raw-cel-1121836087
98.499.9E-MEXP-715-raw-cel-1121836334
90.599.9E-MEXP-715-raw-cel-1121835979
63.599.8GSM75513Col-0 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.249e-1787At1g52830841717IAA6 (INDOLE-3-ACETIC ACID 6)An extragenic dominant suppressor of the hy2 mutant phenotype. Also exhibits aspects of constitutive photomorphogenetic phenotype in the absence of hy2. Mutants have dominant leaf curling phenotype shortened hypocotyls and reduced apical hook. Induced by indole-3-acetic acid.C.G.S.X.
0.135e-961At4g14550827102IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.C.G.S.X.
0.202e-859At1g15580838128IAA5 (INDOLE-3-ACETIC ACID INDUCIBLE 5)auxin induced proteinC.G.S.X.
0.155e-652At5g43700834390ATAUX2-11 (AUXIN INDUCIBLE 2-11)Auxin inducible protein similar to transcription factors.C.G.S.X.
0.043e-446At3g23050821879IAA7 (INDOLE-3-ACETIC ACID 7)Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.C.G.S.X.
0.101e-344At4g14560827103IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.C.G.S.X.
0.155e-342At1g04240839570SHY2 (SHORT HYPOCOTYL 2)SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro.C.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.219e-24111Glycine maxGma.17944.1.S1_atAW570024--7e-24At3g15540IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19)C.G.S.X.
0.102e-342Hordeum vulgareContig322_atContig322--1e-5At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)C.G.S.X.
0.142e-448Oryza sativaOs01g0231000AK066156.1-Auxin-responsive protein (Aux/IAA) (Fragment)2e-13At1g04240SHY2 (SHORT HYPOCOTYL 2)C.G.S.X.
0.201e-1377Populus trichocarpaPtpAffx.16882.1.A1_atCV254130hypothetical protein-1e-13At3g15540IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19)C.G.S.X.
0.128e-548Triticum aestivumTa.18018.1.S1_atCA627383--1e-9At1g52830IAA6 (INDOLE-3-ACETIC ACID 6)C.G.S.X.
0.104e-1063Vitis vinifera1610970_atCB343978--1e-63At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
0.078e-650Zea maysZm.4896.1.A1_x_atBM350512IAA13 - auxin-responsive Aux/IAA family member-3e-9At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0080086The process whose specific outcome is the progression of the filament over time, from its formation to the mature structure. Filament is the stalk of a stamen.
SGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
NGO:0009630The orientation of plant parts under the stimulation of gravity.
NGO:0009638The movement of an organism, or part of an organism, in response to a light stimulus, usually toward or away from it.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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