Gene omics information

Query gene ID At3g15510
Gene name ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g15510820790ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.S.X.H.G.
0.3643.6At1g52880841721NAM (NO APICAL MERISTEM)Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.S.X.H.G.
0.2420.7At4g22790828378MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAS.X.H.G.
0.2217.5At5g14940831346proton-dependent oligopeptide transport (POT) family proteinF:amino acid transmembrane transporter activity, transporter activity;P:oligopeptide transport, response to nematode;C:membrane;PBMOFS.X.H.G.
0.092.8At3g02875821199ILR1 (IAA-LEUCINE RESISTANT 1)Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.S.X.H.G.
0.040.9At2g28130817359unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.010.2At2g28200817366nucleic acid binding / transcription factor/ zinc ion bindingF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOFS.X.H.G.
0.000.0At5g05110830393cysteine protease inhibitor, putative / cystatin, putativeF:cysteine-type endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;PMOS.X.H.G.
0.000.0At5g08750830776zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
349.3100.0GSM133821Yang_1-6_old-pod_Rep3_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thaliana
242.1100.0GSM133819Yang_1-4_old-pod_Rep2_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thaliana
102.999.9GSM133817Yang_1-2_old-pod_Rep1_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thaliana
98.799.9GSM106912opr3_JA 8hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
82.299.9GSM142634MC002_ATH1_A4.3-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
80.699.9GSM106914opr3_JA_8 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
78.999.9GSM142642MC002_ATH1_A7.2-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
75.199.9GSM142633MC002_ATH1_A4.2-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
71.899.9GSM142641MC002_ATH1_A7.1-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
70.199.9GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.392e-90333At1g52880841721NAM (NO APICAL MERISTEM)Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.C.G.S.X.
0.121e-1481At1g61110842404anac025 (Arabidopsis NAC domain containing protein 25)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POC.G.S.X.
0.162e-1377At3g04070819562anac047 (Arabidopsis NAC domain containing protein 47)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.039e-961At3g03200821226anac045 (Arabidopsis NAC domain containing protein 45)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POVMBC.G.S.X.
0.254e-859At1g69490843282NAP (NAC-like, activated by AP3/PI)Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.C.G.S.X.
0.101e-757At1g01720839265ATAF1Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.C.G.S.X.
0.156e-756At1g52890841722ANAC019 (Arabidopsis NAC domain containing protein 19)encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.C.G.S.X.
0.069e-652At1g65910842903anac028 (Arabidopsis NAC domain containing protein 28)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POMC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.276e-2099Glycine maxGmaAffx.84569.1.S1_atBM092513NAC domain protein-6e-17At3g15510ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)C.G.S.X.
0.031e+034Hordeum vulgareContig8993_atContig8993--1e-2At5g61430ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100)C.G.S.X.
0.081e-346Oryza sativaOs07g0566500AK063406.1-No apical meristem (NAM) protein domain containingprotein1e-3At3g15510ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)C.G.S.X.
0.262e-1791Populus trichocarpaPtpAffx.137829.2.S1_atCX655862NAC domain protein, IPR003441 /// NAC domain protein, IPR003441-1e-17At3g15510ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)C.G.S.X.
0.041e-138Triticum aestivumTa.26546.1.A1_atCD491183--6e-3At1g32770ANAC012 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12)C.G.S.X.
0.175e-23107Vitis vinifera1621723_atCA817798hypothetical protein LOC100248744-6e-14At1g61110anac025 (Arabidopsis NAC domain containing protein 25)C.G.S.X.
0.059e-134Zea maysZm.5882.1.A1_atAI637237--2e-1At1g52880NAM (NO APICAL MERISTEM)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007275The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage