Gene omics information

Query gene ID At3g15500
Gene name ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At3g15500820789ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3.S.X.H.G.
0.5065.3At2g31945817753unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.2930.3At1g80160844356lactoylglutathione lyase family protein / glyoxalase I family proteinF:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:unknown;BPOS.X.H.G.
0.2217.5At1g68620843192hydrolaseF:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOMFPAVS.X.H.G.
0.124.9At1g67980843126CCoAMTEncodes S-adenosyl-L-methionine: transcaffeoyl Coenzyme A 3-O-methyltransferase.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
138.199.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
136.599.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
114.899.9GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
98.899.9GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
95.299.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
92.599.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
88.799.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
73.499.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
69.399.9GSM152145siz1-3 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
68.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.502e-142506At1g52890841722ANAC019 (Arabidopsis NAC domain containing protein 19)encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.C.G.S.X.
0.163e-1479At3g04070819562anac047 (Arabidopsis NAC domain containing protein 47)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.112e-963At5g08790830779ATAF2induced by wounding, belongs to a large family of putative transcriptional activators with NAC domain.C.G.S.X.
0.092e-654At1g01720839265ATAF1Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.C.G.S.X.
0.142e-654At1g77450844081anac032 (Arabidopsis NAC domain containing protein 32)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.138e-652At5g63790836499ANAC102 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 102)Encodes a member of the NAC family of transcription factors. ANAC102 appears to have a role in mediating response to low oxygen stress (hypoxia) in germinating seedlings.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.349e-22105Glycine maxGmaAffx.93509.1.S1_s_atCF808510NAC domain protein-2e-9At1g52890ANAC019 (Arabidopsis NAC domain containing protein 19)C.G.S.X.
0.034e+032Hordeum vulgareEBro02_SQ006_A05_atEBro02_SQ006_A05--6e-1At2g12905unknown proteinC.G.S.X.
0.052e-138Oryza sativaOs07g0566500AK063406.1-No apical meristem (NAM) protein domain containingprotein1e-3At3g15510ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)C.G.S.X.
0.342e-38161Populus trichocarpaPtpAffx.10075.2.S1_atAJ780844--8e-39At3g15500ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)C.G.S.X.
0.035e-446Triticum aestivumTa.18638.1.S1_atBQ170645--5e-4At3g15500ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)C.G.S.X.
0.186e-47186Vitis vinifera1609172_atBQ792053hypothetical protein LOC100243607-3e-12At4g27410RD26 (RESPONSIVE TO DESICCATION 26)C.G.S.X.
0.038e-134Zea maysZm.11196.1.A1_atBM379862hypothetical protein LOC100275201-1e+0At5g64160unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009414A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
SGO:0009867A series of molecular signals mediated by jasmonic acid.
CGO:0007275The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage