CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g15450

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.40 50.8 At3g15450 820784 unknown protein F:molecular_function unknown;P:unknown;C:unknown;PBOMF S.X. H.G.
0.61 76.7 At2g20670 816595 unknown protein F:unknown;P:unknown;C:chloroplast;PO S.X. H.G.
0.53 68.6 At2g18700 816385 ATTPS11 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. S.X. H.G.
0.47 61.2 At1g11260 837667 STP1 (SUGAR TRANSPORTER 1) Encodes a H+/hexose cotransporter. S.X. H.G.
0.46 59.8 At5g22920 832356 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBA S.X. H.G.
0.44 57.2 At1g70290 843365 ATTPS8 Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants. S.X. H.G.
0.40 50.8 At1g80440 844383 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.1 99.5 E-MEXP-1112-raw-cel-1590665689
16.1 99.5 E-MEXP-1112-raw-cel-1590665325
15.8 99.5 E-MEXP-1112-raw-cel-1590665845
15.5 99.5 E-MEXP-1112-raw-cel-1590665273
15.4 99.5 E-MEXP-1112-raw-cel-1590665429
13.5 99.4 E-MEXP-1112-raw-cel-1590665741
13.2 99.4 GSM158702 HY213-ESTRADIOL-REP1 GSE6954 Identification of AGL24 downstream genes by using XVE inducible system
11.0 99.2 GSM10477 lec1-1 24-Hr Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
10.9 99.2 E-MEXP-1112-raw-cel-1590665793
10.8 99.2 GSM10478 lec1-1 24-Hr Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.22 4e-7 56 At4g27450 828854 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;PBOMF C.G. S.X.
0.07 6e-3 42 At5g43830 834405 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus;BPOM C.G. S.X.
0.01 4e-1 36 At5g27000 832758 ATK4 (ARABIDOPSIS THALIANA KINESIN 4) Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. C.G. S.X.
0.01 4e-1 36 At1g54960 841937 ANP2 member of MEKK subfamily C.G. S.X.
0.01 2e+0 34 At5g63020 836422 disease resistance protein (CC-NBS-LRR class), putative F:ATP binding;P:N-terminal protein myristoylation, defense response;C:cellular_component unknown;PMBOFA C.G. S.X.
0.02 2e+0 34 At4g13070 826921 group II intron splicing factor CRS1-related F:RNA binding;P:biological_process unknown;C:unknown;POMB C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 6e-7 56 Glycine max Gma.7163.2.S1_at BE661209 - - 1e-12 At4g27450 unknown protein C.G. S.X.
0.03 1e+1 30 Hordeum vulgare Contig14485_at Contig14485 - - 9e-2 At1g34770 MAGE-8 antigen-related C.G. S.X.
0.03 7e-1 36 Oryza sativa OsAffx.15464.1.S1_at - - - 0 C.G. S.X.
0.20 4e-17 89 Populus trichocarpa Ptp.7015.1.S1_s_at CK092368 hypothetical protein - 5e-26 At4g27450 unknown protein C.G. S.X.
0.03 6e+0 32 Triticum aestivum TaAffx.120686.1.S1_at BJ210377 - - 2e+0 At3g15450 unknown protein C.G. S.X.
0.19 5e-13 73 Vitis vinifera 1613301_at CF372159 hypothetical protein LOC100261977 - 1e-12 At3g15450 unknown protein C.G. S.X.
0.03 1e+1 30 Zea mays Zm.4563.1.A1_at AI734806 - - 2e-1 At5g23920 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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