Gene omics information

Query gene ID At3g15050
Gene name IQD10 (IQ-domain 10)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g15050820734IQD10 (IQ-domain 10)F:calmodulin binding;P:biological_process unknown;C:chloroplast;PS.X.H.G.
1.00100.0At2g29130817462LAC2 (laccase 2)putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydrationS.X.H.G.
0.9897.8At1g22480838854plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PFOS.X.H.G.
0.9897.8At1g80170844357polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMAS.X.H.G.
0.9697.3At3g50220824184unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POBS.X.H.G.
0.9496.7At1g32770840171ANAC012 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12)Encodes SND1, a NAC Domain transcription factor involved in secondary wall biosynthesis in fibers. Expressed specifically in interfascicular fibers and xylary fibers in stems. Expressed in the procambium of stem inflorescences and root. May act as a negative regulator of secondary wall thickening in xylary fibers. Acts redundantly with NST1 to control development of secondary walls in siliques.S.X.H.G.
0.9496.7At5g60490836170FLA12F:unknown;P:unknown;C:plasma membrane, anchored to membrane;PBOMAFS.X.H.G.
0.9396.4At2g41610818759unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9296.0At1g27380839627RIC2 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 2)encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC4 (family subgroup V). Gene is expressed in all tissues examined.S.X.H.G.
0.9296.0At5g03170831914FLA11F:unknown;P:unknown;C:anchored to membrane;PBOMAFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
349.2100.0GSM131656ATGE_27_BGSE5633AtGenExpress: Developmental series (shoots and stems)
342.9100.0GSM131655ATGE_27_AGSE5633AtGenExpress: Developmental series (shoots and stems)
320.0100.0GSM131657ATGE_27_CGSE5633AtGenExpress: Developmental series (shoots and stems)
259.6100.0GSM133753Turner_A-7-Turne-WT-Base1_SLDGSE5729Role of COV in vascular patterning
153.099.9GSM133754Turner_A-8-Turne-WT-Base2_SLDGSE5729Role of COV in vascular patterning
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.071e-1067At2g33990817960iqd9 (IQ-domain 9)F:calmodulin binding;P:biological_process unknown;C:plasma membrane;POMC.G.S.X.
0.021e-138At3g26440822248unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOC.G.S.X.
0.014e-136At2g29510817500unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVC.G.S.X.
0.014e-136At1g58260842194CYP79C2 (CYTOCHROME P450 79C2)member of CYP79C subfamily of cytochrome p450s. Encodes a putative xylan endohydrolase. similar to some closely linked pseudogenes.C.G.S.X.
0.022e+034At4g02800828171unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFBPVAC.G.S.X.
0.032e+034At4g28703828989-F:molecular_function unknown;P:unknown;C:cellular_component unknown;BOPC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.066e-446Glycine maxGma.18088.1.S1_atBI970254--6e-3At2g33990iqd9 (IQ-domain 9)C.G.S.X.
0.042e-446Hordeum vulgareContig10758_atContig10758--2e-10At3g22190IQD5 (IQ-domain 5)C.G.S.X.
0.035e-240Oryza sativaOs06g0155300AK099462.1-IQ calmodulin-binding region domain containingprotein5e-2At3g15050IQD10 (IQ-domain 10)C.G.S.X.
0.147e-1685Populus trichocarpaPtpAffx.1356.2.A1_a_atCK320740hypothetical protein-6e-16At3g15050IQD10 (IQ-domain 10)C.G.S.X.
0.052e+034Triticum aestivumTa.28819.3.S1_a_atBJ207606--4e-3At2g33990iqd9 (IQ-domain 9)C.G.S.X.
0.032e+032Vitis vinifera1618346_atCD801523--2e-2At5g03740HD2C (HISTONE DEACETYLASE 2C)C.G.S.X.
0.023e+032Zea maysZm.5943.1.A1_atAI665888--3e-1At5g30510RPS1 (RIBOSOMAL PROTEIN S1)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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