Gene omics information

Query gene ID At3g14650
Gene name CYP72A11
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g14650820693CYP72A11putative cytochrome P450S.X.H.G.
0.4963.5At4g02260828096RSH1 (RELA-SPOT HOMOLOG 1)F:catalytic activity;P:response to wounding;C:chloroplast;BOPMAFVS.X.H.G.
0.4963.5At5g42310834236pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:chloroplast;POMFBAS.X.H.G.
0.4659.8At1g23400838948CAF2Promotes the splicing of chloroplast group II introns.S.X.H.G.
0.4659.8At4g01800827922preprotein translocase secA subunit, putativeF:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast stroma, chloroplast, chloroplast envelope;OBPMAS.X.H.G.
0.4659.8At5g50920835165CLPC1Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.S.X.H.G.
0.4457.2At5g42390834245metalloendopeptidaseF:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:mitochondrion, chloroplast stroma, chloroplast;BOMFPAVS.X.H.G.
0.4152.4At4g30993829225unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.4152.4At2g24820817019TIC55 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55)F:electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding;P:oxidation reduction;C:chloroplast, chloroplast envelope;BOPMFAS.X.H.G.
0.3948.4At5g60600836181HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.699.1GSM133787Brueggemann_A-5-Brueg-Mck_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
8.499.0GSM133786Brueggemann_A-4-Brueg-PpH_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.9302179At3g14660820694CYP72A13putative cytochrome P450C.G.S.X.
0.9001877At3g14690820697CYP72A15putative cytochrome P450C.G.S.X.
0.8801576At3g14680820696CYP72A14putative cytochrome P450C.G.S.X.
0.8701524At3g14640820692CYP72A10putative cytochrome P450C.G.S.X.
0.646e-94345At3g14630820691CYP72A9putative cytochrome P450C.G.S.X.
0.463e-28127At3g14610820689CYP72A7putative cytochrome P450C.G.S.X.
0.099e-1065At3g14620820690CYP72A8putative cytochrome P450C.G.S.X.
0.015e-240At3g55060824672unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.022e-138At1g06540837165unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-344Glycine maxGmaAffx.24227.1.S1_atBQ298345--5e-7At3g14640CYP72A10C.G.S.X.
0.066e-652Hordeum vulgareContig20974_atContig20974--7e-6At3g14650CYP72A11C.G.S.X.
0.051e-140Oryza sativaOs01g0602400AK107349.1-Cytochrome P450 monooxygenase CYP72A5 (Fragment)6e-2At3g14650CYP72A11C.G.S.X.
0.022e-242Populus trichocarpaPtp.857.1.S1_atCK089982hypothetical protein-4e-1At1g62770invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.063e-344Triticum aestivumTa.13841.1.S1_atAJ440511--6e-5At3g14680CYP72A14C.G.S.X.
0.042e-136Vitis vinifera1619325_atCF211836hypothetical protein LOC100263459-6e-4At3g14660CYP72A13C.G.S.X.
0.061e-654Zea maysZm.9289.1.A1_atBM267824--1e-6At3g14680CYP72A14C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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