Gene omics information

Query gene ID At3g14415
Gene name (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g14415820664(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeF:glycolate oxidase activity, electron carrier activity, oxidoreductase activity, FMN binding, catalytic activity;P:metabolic process;C:in 6 components;OBFMPAS.X.H.G.
0.7184.2At1g32060840098PRK (PHOSPHORIBULOKINASE)F:protein binding, phosphoribulokinase activity, ATP binding;P:response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation, biosynthetic process;C:in 8 components;BPOMFAVS.X.H.G.
0.6075.7At2g21330816672fructose-bisphosphate aldolase, putativeF:fructose-bisphosphate aldolase activity, catalytic activity;P:response to cadmium ion, pentose-phosphate shunt;C:in 8 components;OMBPFS.X.H.G.
0.5673.0At1g68010843129HPREncodes hydroxypyruvate reductase.S.X.H.G.
0.5065.3At5g09660830825PMDH2 (peroxisomal NAD-malate dehydrogenase 2)encodes a microbody NAD-dependent malate dehydrogenase encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.S.X.H.G.
0.4862.5At1g42970840895GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase.S.X.H.G.
0.4355.3At3g54050824572fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeF:fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity;P:response to cold, fructose metabolic process;C:apoplast, stromule, chloroplast stroma, chloroplast;BOMPFAS.X.H.G.
0.3846.7At1g09340837455CRB (CHLOROPLAST RNA BINDING)Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes.S.X.H.G.
0.3032.1At2g13360815822AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE)Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.398.3GSM109118wild-type(Col-0) 3 day, biological rep3GSE4847Expression data from tocopherol deficient seedlings of Arabidopsis
5.298.2E-TABM-21-raw-cel-529815951
5.198.2E-MEXP-546-raw-cel-863289220
5.198.2E-TABM-21-raw-cel-529816160
5.098.1GSM322551genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Un-inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
5.098.1GSM297382At.StarchSD.WTSS3.SS3R1L1GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycle
5.098.1E-TABM-21-raw-cel-529816040
5.098.1GSM131376AtGen_6-5512_Genotoxicstress-Shoots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)
4.998.1E-TABM-21-raw-cel-529816526
4.998.1GSM260879A2-Greco-WTGSE10322Higher order transcriptional regulation conferred by the bountiful gain of function mutant
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.9101524At3g14420820665(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeF:glycolate oxidase activity;P:metabolic process;C:in 7 components;OBFMPAC.G.S.X.
0.585e-72272At4g18360827563(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeF:glycolate oxidase activity, electron carrier activity, oxidoreductase activity, FMN binding, catalytic activity;P:metabolic process;C:peroxisome;OBFMPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.603e-148525Glycine maxGma.7309.2.S1_s_atCD408975Peroxisomal glycolate oxidase-4e-148At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.323e-44178Hordeum vulgareContig1774_atContig1774--2e-72At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.278e-1789Oryza sativaOs04g0623500AK068638.1-(S)-2-hydroxy-acid oxidase, peroxisomal (EC1.1.3.15) (Glycolate oxidase) (GOX) (Short chainalpha-hydroxy acid oxidase)7e-29At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.611e-107391Populus trichocarpaPtp.6667.1.S1_s_atCX185361hypothetical protein-9e-108At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.305e-35149Triticum aestivumTa.28197.1.S1_atBQ620267--2e-60At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.588e-130462Vitis vinifera1622249_atCA817903glycolate oxidase-like-6e-153At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.202e-859Zea maysZm.2298.2.A1_a_atBQ619139hypothetical protein LOC100192687-1e-21At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00118Link to KaPPA-View 4Glycolate pathway



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00630Link to KEGG PATHWAYGlyoxylate and dicarboxylate metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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