Gene omics information

Query gene ID At3g14370
Gene name WAG2
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At3g14370820658WAG2The WAG2 and its homolog, WAG1 each encodes protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.S.X.H.G.
0.5773.8At4g11610826766C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.5773.8At4g30290829152XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19)putative xyloglucan endotransglycosylase/hydrolase, expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow.S.X.H.G.
0.4050.8At4g35720829724unknown proteinF:unknown;P:unknown;C:unknown;POS.X.H.G.
0.2522.6At1g65310842839XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17)putative xyloglucan endotransglycosylase/hydrolase, expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
124.299.9GSM184893Arabidopsis, root cells, columella root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
97.699.9E-MEXP-1304-raw-cel-1530618235
78.599.9GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
76.399.9E-MEXP-715-raw-cel-1121836087
68.299.9E-MEXP-715-raw-cel-1121836113
63.299.8GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatments
61.499.8GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
61.499.8E-MEXP-1784-raw-cel-1661573074
58.999.8GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatments
58.699.8GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.546e-29129At1g53700841807WAG1 (WAG 1)The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.C.G.S.X.
0.011e-242At5g22790832342RER1 (RETICULATA-RELATED 1)F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, plastid, chloroplast inner membrane, chloroplast envelope;MOBPFVAC.G.S.X.
0.031e-242At5g47750834826D6PKL2 (D6 PROTEIN KINASE LIKE 2)F:kinase activity;P:protein amino acid phosphorylation;C:nucleolus, nucleus, cytoplasm;MOPFBVAC.G.S.X.
0.031e-242At1g71880843519SUC1 (Sucrose-proton symporter 1)Sucrose transporter gene induced in response to nematodes; member of Sucrose-proton symporter family.C.G.S.X.
0.015e-240At1g32750840169HAF01This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.C.G.S.X.
0.025e-240At1g16440838214kinaseF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MOPFBVAC.G.S.X.
0.022e-138At5g48385834893-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBFC.G.S.X.
0.022e-138At4g35150829667O-methyltransferase family 2 proteinF:methyltransferase activity, O-methyltransferase activity, protein dimerization activity;P:unknown;C:cytosol;PBFMOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-138Glycine maxGmaAffx.28655.1.S1_atBG041265--4e-1At2g28910CXIP4 (CAX INTERACTING PROTEIN 4)C.G.S.X.
0.036e-342Hordeum vulgareContig10096_atContig10096--4e-3At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.032e-242Oryza sativaOsAffx.25276.1.S1_at---0C.G.S.X.
0.192e-861Populus trichocarpaPtpAffx.201381.1.S1_atpmrna2723hypothetical protein-1e-5At3g14370WAG2C.G.S.X.
0.032e-138Triticum aestivumTaAffx.57191.1.S1_atCA634803--2e-1At4g31580SRZ-22C.G.S.X.
0.038e-134Vitis vinifera1613085_atCB969437hypothetical protein LOC100262213-3e-34At3g45780PHOT1 (PHOTOTROPIN 1)C.G.S.X.
0.023e-136Zea maysZm.10513.2.S1_a_atAY106791.1hypothetical protein LOC100277818-3e-3At1g68390unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0048825The process whose specific outcome is the progression of the cotyledon over time, from its formation to the mature structure. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling.
XGO:0009630The orientation of plant parts under the stimulation of gravity.
XGO:0009926The unidirectional movement of auxin in the stem from tip to base along the vector of gravity or basipetally.
XGO:0048364The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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