Gene omics information

Query gene ID At3g14350
Gene name SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g14350820655SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cytosol, nucleus, plasma membrane;MPOBFVAS.X.H.G.
0.4355.3At2g25800817122-F:unknown;P:biological_process unknown;C:unknown;POMFBS.X.H.G.
0.4355.3At2g22125816747bindingF:binding;P:biological_process unknown;C:plasma membrane;PMFOBAS.X.H.G.
0.4050.8At5g05170830399CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis.S.X.H.G.
0.4050.8At2g25430817081epsin N-terminal homology (ENTH) domain-containing proteinF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:nucleus, plasma membrane;MPOBFAVS.X.H.G.
0.3948.4At2g42880818888ATMPK20member of MAP KinaseS.X.H.G.
0.3948.4At4g32410829376CESA1 (CELLULOSE SYNTHASE 1)Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis.S.X.H.G.
0.3948.4At5g64740836595CESA6 (CELLULOSE SYNTHASE 6)Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles.S.X.H.G.
0.3541.6At1g28340839730AtRLP4 (Receptor Like Protein 4)F:protein binding;P:signal transduction;C:endomembrane system;PMOBFAS.X.H.G.
0.3032.1At2g20990816633SYTA (SYNAPTOTAGMIN A)Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.099.7GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
31.599.7GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
30.699.7GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
28.899.7GSM265424Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
20.799.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
20.599.6GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
16.599.5GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
15.799.5GSM131569ATGE_95_CGSE5631AtGenExpress: Developmental series (roots)
15.699.5GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
15.099.4GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.644e-176619At1g53730841811SRF6 (STRUBBELIG-RECEPTOR FAMILY 6)F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.071e-965At4g22130828302SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)F:in 6 functions;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.041e-656At4g03390827941SRF3 (STRUBBELIG-RECEPTOR FAMILY 3)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
0.022e-552At3g28690822499protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.242e-34149Glycine maxGma.8678.1.S1_atBE823227--9e-37At1g53730SRF6 (STRUBBELIG-RECEPTOR FAMILY 6)C.G.S.X.
0.051e-757Hordeum vulgareContig6843_atContig6843--2e-32At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.089e-963Oryza sativaOs.3356.1.S1_at---0C.G.S.X.
0.273e-51204Populus trichocarpaPtp.2221.1.A1_atCV231780hypothetical protein-9e-40At1g53730SRF6 (STRUBBELIG-RECEPTOR FAMILY 6)C.G.S.X.
0.063e-757Triticum aestivumTa.19055.1.A1_atCK205684--8e-23At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.222e-36153Vitis vinifera1619614_atCF372273hypothetical protein LOC100249831-2e-36At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.114e-23109Zea maysZm.383.1.S1_s_atAF023165.1leucine-rich repeat transmembrane protein kinase 2-1e-22At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006468The process of introducing a phosphate group on to a protein.
CGO:0007169The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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