Gene omics information

Query gene ID At3g14190
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7184.2At3g14190820636unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9095.1At4g15830827264bindingF:binding;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.8089.8At3g25980822195mitotic spindle checkpoint protein, putative (MAD2)F:DNA binding;P:mitosis, mitotic cell cycle spindle assembly checkpoint;C:endomembrane system;MFOPS.X.H.G.
0.7687.4At2g26760817217CYCB1F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFVS.X.H.G.
0.7385.5At3g12870820470unknown proteinF:unknown;P:unknown;C:cellular_component unknown;PS.X.H.G.
0.7385.5At4g05190825867ATK5 (ARABIDOPSIS THALIANA KINESIN 5)ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts.S.X.H.G.
0.7385.5At5g36710833636unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7284.8At1g02730839467ATCSLD5Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.S.X.H.G.
0.7284.8At1g18370838418HIK (HINKEL)Mutant has cytokinesis defects; seedling lethalS.X.H.G.
0.7284.8At1g76310843964CYCB2core cell cycle genesS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
103.999.9GSM133761Lindsey_1-13_torpedo-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
23.899.6GSM131674ATGE_49_BGSE5633AtGenExpress: Developmental series (shoots and stems)
23.099.6GSM10442WT Ovule 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
22.899.6GSM242959Steroid day 3 (day3D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
22.299.6GSM131670ATGE_48_AGSE5633AtGenExpress: Developmental series (shoots and stems)
21.699.6GSM10446WT 24-Hr Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
21.299.6GSM131673ATGE_49_AGSE5633AtGenExpress: Developmental series (shoots and stems)
20.799.6GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
20.499.6GSM131676ATGE_50_AGSE5633AtGenExpress: Developmental series (shoots and stems)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.095e-342At5g12360831111unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.027e-238At4g26890828796MAPKKK16member of MEKK subfamilyC.G.S.X.
0.027e-238At3g22670821838pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:mitochondrion;POFMBAC.G.S.X.
0.013e-136At5g20490832171XIKEncodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.C.G.S.X.
0.013e-136At2g31650817721ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX)Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P.C.G.S.X.
0.023e-136At1g60590842353polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBMOVAC.G.S.X.
0.031e+034At4g14220827062RHF1A (RING-H2 GROUP F1A)encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. RHF1a can interact with the cell cycle inhibitor ICK4/KRP6 in vitro. It apppears to target ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF1a is expressed in the carpels throughout floral development. It is expressed in various tissues of the anthers during the early stages of anther development but not in stage 12 flowers and beyond.C.G.S.X.
0.011e+034At3g28380822467PGP17 (P-GLYCOPROTEIN 17)F:ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:transport;C:plasma membrane;BOMAFPVC.G.S.X.
0.011e+034At2g46020819210transcription regulatory protein SNF2, putativeEncodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Glycine maxHgAffx.9252.1.S1_atCB379249--8e-2At3g14190unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareContig11923_atContig11923--3e-1At4g28240wound-responsive protein-relatedC.G.S.X.
0.031e-138Oryza sativaOs.38988.1.S1_at---0C.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.213701.1.S1_atpmrna26741hypothetical protein-1e-16Atcg01060-C.G.S.X.
0.035e+032Triticum aestivumTaAffx.29466.1.S1_atCA642257--4e+0At3g14190unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1614442_atCB970667hypothetical protein LOC100253371-7e-6At1g12830unknown proteinC.G.S.X.
0.032e+032Zea maysZmAffx.853.1.A1_atAI770653--2e-1At3g06130heavy-metal-associated domain-containing proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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