Gene omics information

Query gene ID At3g14070
Gene name CAX9 (CATION EXCHANGER 9)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At3g14070820622CAX9 (CATION EXCHANGER 9)Involved in cation (K, Na and Mn) homeostasis and transportS.X.H.G.
0.4253.9At1g14530838015THH1 (TOM THREE HOMOLOG 1)F:virion binding;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.4050.8At2g06005815154unknown proteinEncodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.S.X.H.G.
0.2217.5At4g01960828190unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.1912.7At5g35410833502SOS2 (SALT OVERLY SENSITIVE 2)encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutritionS.X.H.G.
0.1912.7At4g35500829702protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVAS.X.H.G.
0.1811.4At4g32920829429glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;BOMPFVAS.X.H.G.
0.157.8At1g15920838162CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;PMOFS.X.H.G.
0.146.8At5g04460830324protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOPFBVS.X.H.G.
0.135.8At4g35940829749unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
235.6100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
220.7100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
200.2100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
189.0100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
177.5100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
173.4100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
166.8100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
153.799.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
149.699.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
143.799.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.680747At1g54115841851CCX4 (CATION CALCIUM EXCHANGER 4)Involved in cation (Na and K) homeostasis.C.G.S.X.
0.042e-242At5g17850831653cation exchanger, putative (CAX8)F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPAC.G.S.X.
0.016e-240At4g02280828081SUS3 (sucrose synthase 3)Encodes a protein with sucrose synthase activity (SUS3).C.G.S.X.
0.011e+036At4g35250829678vestitone reductase-relatedF:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:chloroplast;BOPFMAC.G.S.X.
0.011e+036At3g25700822158chloroplast nucleoid DNA-binding protein-relatedF:aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMOFC.G.S.X.
0.011e+036At3g07250819913nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:transport, nucleocytoplasmic transport;C:intracellular;MOPFVBC.G.S.X.
0.011e+036At1g05790837088lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:endomembrane system;MPOFBC.G.S.X.
0.011e+036At1g08960837416CAX11member of Potassium-dependent sodium-calcium exchanger like-familyC.G.S.X.
0.011e+036At1g77380844074AAP3Amino acid permease which transports basic amino acids.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.059e-550Glycine maxGmaAffx.21223.1.S1_atAW570106--2e-5At3g14070CAX9 (CATION EXCHANGER 9)C.G.S.X.
0.062e-344Hordeum vulgareContig12493_atContig12493--5e-8At1g54115CCX4 (CATION CALCIUM EXCHANGER 4)C.G.S.X.
0.073e-242Oryza sativaOs03g0180000CF326916-Sodium/calcium exchanger membrane region domaincontaining protein1e-9At1g54115CCX4 (CATION CALCIUM EXCHANGER 4)C.G.S.X.
0.036e-344Populus trichocarpaPtpAffx.212246.1.S1_atpmrna24008Ca2+ antiporter/cation exchanger-5e-1At5g17850cation exchanger, putative (CAX8)C.G.S.X.
0.026e-240Triticum aestivumTa.21094.2.S1_atCA611488--4e+0At1g77290tetrachloro-p-hydroquinone reductive dehalogenase-relatedC.G.S.X.
0.021e+034Vitis vinifera1620317_atCF205562.1--8e-8At5g11070unknown proteinC.G.S.X.
0.012e+034Zea maysZm.3284.2.A1_a_atCF631443--5e+0At5g45750AtRABA1c (Arabidopsis Rab GTPase homolog A1c)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0030003Any process involved in the maintenance of an internal equilibrium of cations at the level of a cell.
XGO:0043157A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.
CGO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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