Gene omics information

Query gene ID At3g14050
Gene name RSH2 (RELA-SPOT HOMOLOG 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At3g14050820619RSH2 (RELA-SPOT HOMOLOG 2)F:GTP diphosphokinase activity;P:response to abscisic acid stimulus, response to wounding;C:chloroplast;BOMPFAVS.X.H.G.
0.6781.6At2g05940815147protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.3846.7At4g34390829589XLG2 (extra-large GTP-binding protein 2)F:guanyl nucleotide binding, signal transducer activity;P:in 7 processes;C:nucleus;MFPOBS.X.H.G.
0.3338.1At3g53810824548lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.2930.3At1g29690839846CAD1 (constitutively activated cell death 1)Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
123.699.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
87.799.9E-MEXP-807-raw-cel-1173272948
65.299.8E-MEXP-546-raw-cel-863289424
42.199.8E-MEXP-98-raw-cel-320188859
41.099.8E-MEXP-807-raw-cel-1173273252
37.699.7E-MEXP-98-raw-cel-320188804
36.599.7GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
34.699.7GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responses
34.399.7GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responses
33.999.7E-MEXP-546-raw-cel-863289586
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.6501001At1g54130841853RSH3 (RELA/SPOT HOMOLOG 3)F:GTP diphosphokinase activity;P:guanosine tetraphosphate metabolic process;C:chloroplast;BOMPFAVC.G.S.X.
0.012e-242At1g26330839175DNA bindingF:DNA binding;P:biological_process unknown;C:nucleus;OMPBFC.G.S.X.
0.017e-240At5g19260832046unknown proteinF:unknown;P:unknown;C:unknown;MOFPBVC.G.S.X.
0.017e-240At5g25590832634-F:unknown;P:N-terminal protein myristoylation;C:unknown;MOFPBVAC.G.S.X.
0.017e-240At2g22080816743unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:nucleus;MBOFPVAC.G.S.X.
0.013e-138At4g25190828622unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;OMFBPVC.G.S.X.
0.013e-138At3g55150824681ATEXO70H1 (exocyst subunit EXO70 family protein H1)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.403e-91337Glycine maxGma.4228.1.S1_atAI856764--1e-91At3g14050RSH2 (RELA-SPOT HOMOLOG 2)C.G.S.X.
0.113e-1893Hordeum vulgareContig9702_atContig9702--2e-8At1g54130RSH3 (RELA/SPOT HOMOLOG 3)C.G.S.X.
0.191e-23113Oryza sativaOs08g0457600AK065020.1-RSH28e-24At3g14050RSH2 (RELA-SPOT HOMOLOG 2)C.G.S.X.
0.316e-34147Populus trichocarpaPtpAffx.11635.1.S1_atBP931125hypothetical protein-2e-34At3g14050RSH2 (RELA-SPOT HOMOLOG 2)C.G.S.X.
0.151e-965Triticum aestivumTa.6013.1.S1_atBJ269332--9e-10At3g14050RSH2 (RELA-SPOT HOMOLOG 2)C.G.S.X.
0.041e-344Vitis vinifera1615365_atCB973771hypothetical protein LOC100253158-2e-14At1g54130RSH3 (RELA/SPOT HOMOLOG 3)C.G.S.X.
0.035e-136Zea maysZm.7011.1.S1_s_atCA398268hypothetical protein LOC100191203-3e-19At4g21110G10 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009611A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00002Link to KaPPA-View 4Purine metabolism



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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