Gene omics information

Query gene ID At3g12910
Gene name transcription factor
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At3g12910820475transcription factorF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PS.X.H.G.
0.3338.1At1g07160837227protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:chloroplast, protein serine/threonine phosphatase complex;MPOFBVAS.X.H.G.
0.3338.1At4g11470826752protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.135.8At4g14455827091ATBET12Encodes a Bet1/Sft1-like SNARE protein, which can only partially suppresses the temperature-sensitive growth defect in sft1-1 yeast cells; however, it cannot support the deletion of the yeast BET1 gene (bet1Δ). In yeast, Bet1p is the v-SNARE (soluble N-ethylmaleimide-sensitive factor adaptor protein receptor, V-type) involved in trafficking between the ER and Golgi.S.X.H.G.
0.135.8At5g57220835828CYP81F2member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
461.1100.0E-NASC-76-raw-cel-1359879132
171.8100.0GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutants
150.999.9GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
132.799.9GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutants
126.099.9GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutants
124.499.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
124.299.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
120.799.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
108.799.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
106.999.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.218e-1271At2g43000818902anac042 (Arabidopsis NAC domain containing protein 42)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.042e-654At2g18060816318VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1)Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.C.G.S.X.
0.063e-550At5g66300836762NAC105 (NAC DOMAIN CONTAINING PROTEIN 105)Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.C.G.S.X.
0.041e-448At1g32870840181ANAC13 (Arabidopsis thaliana NAC domain protein 13)F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMFC.G.S.X.
0.035e-446At2g24430816979ANAC038 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 38)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PMFC.G.S.X.
0.045e-446At1g77450844081anac032 (Arabidopsis NAC domain containing protein 32)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.062e-344At5g39820833978anac094 (Arabidopsis NAC domain containing protein 94)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POMC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-448Glycine maxGmaAffx.30791.1.S1_atBE330831--8e-5At3g12910transcription factorC.G.S.X.
0.029e-444Hordeum vulgareContig9284_atContig9284--3e-18At3g04060anac046 (Arabidopsis NAC domain containing protein 46)C.G.S.X.
0.112e-757Oryza sativaOsAffx.7880.1.S1_at---0C.G.S.X.
0.126e-446Populus trichocarpaPtpAffx.207233.1.S1_atpmrna14341NAC domain protein, IPR003441-3e-4At3g12910transcription factorC.G.S.X.
0.022e+034Triticum aestivumTaAffx.30286.1.S1_atCA626468--9e-1At1g65970TPX2 (thioredoxin-dependent peroxidase 2)C.G.S.X.
0.172e-652Vitis vinifera1613141_atCF518362hypothetical protein LOC100259242-2e-14At2g43000anac042 (Arabidopsis NAC domain containing protein 42)C.G.S.X.
0.022e-136Zea maysZm.15325.1.A1_atBM349691hypothetical protein LOC100280318-4e-1At3g12910transcription factorC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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