Gene omics information

Query gene ID At3g12840
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7184.2At3g12840820466unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownS.X.H.G.
0.8592.4At4g30540829177glutamine amidotransferase class-I domain-containing proteinF:catalytic activity;P:unknown;C:cellular_component unknown;OBAFPVMS.X.H.G.
0.8190.4At1g501903767425-F:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknownS.X.H.G.
0.8089.8At4g18500827582unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7788.0At2g026703768646-F:unknown;P:unknown;C:unknownS.X.H.G.
0.7385.5At1g18220838402ATPUP9Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.S.X.H.G.
0.7184.2At4g20290827776unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMS.X.H.G.
0.7184.2At4g10410826633-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7083.5At5g28170832893transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6579.6At3g16930820948unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
301.8100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
293.5100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
291.4100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
285.3100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
283.5100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
271.2100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
253.3100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
249.3100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
228.9100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
223.9100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.066e-754At4g10400826632F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMC.G.S.X.
0.076e-754At4g09920826581F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMC.G.S.X.
0.054e-548At5g56410835742F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.042e-342At3g10750820244-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.048e-340At5g38565833845-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.063e-238At1g19410838524-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.033e-238At1g12600837816-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBAC.G.S.X.
0.041e-136At4g10410826633-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e+032Glycine maxHgAffx.23900.1.S1_atCB826526--1e+0At5g62750unknown proteinC.G.S.X.
0.063e-134Hordeum vulgareContig24666_atContig24666--6e-1At3g12840unknown proteinC.G.S.X.
0.071e+034Oryza sativaOsAffx.15873.1.S1_at---0C.G.S.X.
0.037e-134Populus trichocarpaPtpAffx.210384.1.S1_atpmrna20406--2e-28At2g33730DEAD box RNA helicase, putativeC.G.S.X.
0.055e-134Triticum aestivumTa.7170.1.S1_atBJ316709--9e-1At3g12840unknown proteinC.G.S.X.
0.062e+030Vitis vinifera1619263_atCA814227--2e+0At2g03933-C.G.S.X.
0.054e+030Zea maysZmAffx.1359.1.S1_at40794996-47--1e+1At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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