Gene omics information

Query gene ID At3g12220
Gene name scpl16 (serine carboxypeptidase-like 16)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6378.1At3g12220820402scpl16 (serine carboxypeptidase-like 16)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOS.X.H.G.
0.6075.7At1g24320839048alpha-glucosidase, putativeF:mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity;P:oligosaccharide metabolic process;C:cellular_component unknown;MFOBPAS.X.H.G.
0.6075.7At3g46500823803oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:biological_process unknown;C:cellular_component unknown;POBFMS.X.H.G.
0.5368.6At5g05900830475UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFS.X.H.G.
0.5065.3At1g15640838134unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At3g11390820311DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVS.X.H.G.
0.4659.8At3g60470825218unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
180.1100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
158.499.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
154.299.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
150.399.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
144.199.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
140.999.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
128.699.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
123.799.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
120.299.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.899.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8801164At3g12230820403scpl14 (serine carboxypeptidase-like 14)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBC.G.S.X.
0.840920At3g12240820404SCPL15 (serine carboxypeptidase-like 15)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBC.G.S.X.
0.652e-152539At3g12203820399scpl17 (serine carboxypeptidase-like 17)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBC.G.S.X.
0.618e-96351At3g10450820209SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.554e-79295At1g73280843662scpl3 (serine carboxypeptidase-like 3)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.552e-75284At1g73310843665scpl4 (serine carboxypeptidase-like 4)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.562e-75284At1g73300843664scpl2 (serine carboxypeptidase-like 2)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.512e-65250At1g73290843663scpl5 (serine carboxypeptidase-like 5)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.086e-550Glycine maxGmaAffx.60252.1.S1_atBI321448--6e-9At3g12203scpl17 (serine carboxypeptidase-like 17)C.G.S.X.
0.025e+032Hordeum vulgareHVSMEk0011A09f_x_atHVSMEk0011A09f--8e-1At1g52320unknown proteinC.G.S.X.
0.025e+034Oryza sativaOsAffx.21145.1.S1_at---0C.G.S.X.
0.134e-963Populus trichocarpaPtpAffx.216395.1.S1_x_atpmrna31153hypothetical protein-7e-16At1g73300scpl2 (serine carboxypeptidase-like 2)C.G.S.X.
0.023e+034Triticum aestivumTa.3507.1.S1_atBQ172406--1e-1At1g73280scpl3 (serine carboxypeptidase-like 3)C.G.S.X.
0.025e-238Vitis vinifera1610485_a_atCF207352hypothetical protein LOC100263653-1e+0At4g02980ABP1 (ENDOPLASMIC RETICULUM AUXIN BINDING PROTEIN 1)C.G.S.X.
0.013e-136Zea maysZm.3679.1.A1_atCF036994hypothetical protein LOC100279871-1e-36At2g47510FUM1 (FUMARASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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