Gene omics information

Query gene ID At3g12203
Gene name scpl17 (serine carboxypeptidase-like 17)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.146.8At3g12203820399scpl17 (serine carboxypeptidase-like 17)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBS.X.H.G.
0.4355.3At1g25410839127ATIPT6AB061404 Arabidopsis thaliana AtIPT6 mRNA for cytokinin synthase, complete cdsS.X.H.G.
0.4050.8At1g73290843663scpl5 (serine carboxypeptidase-like 5)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOS.X.H.G.
0.3235.7At2g25940817135ALPHA-VPE (alpha-vacuolar processing enzyme)Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.S.X.H.G.
0.3235.7At3g04200819575germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1187.5100.0GSM10453WT Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
417.2100.0GSM131694ATGE_79_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
374.8100.0GSM131696ATGE_79_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
346.6100.0GSM131695ATGE_79_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
342.3100.0GSM10451WT Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
295.7100.0GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
283.0100.0GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
267.4100.0GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.671e-159563At3g12240820404SCPL15 (serine carboxypeptidase-like 15)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBC.G.S.X.
0.652e-152539At3g12220820402scpl16 (serine carboxypeptidase-like 16)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.654e-150531At3g12230820403scpl14 (serine carboxypeptidase-like 14)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBC.G.S.X.
0.564e-76286At3g10450820209SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.433e-49196At2g22970816828serine carboxypeptidase S10 family proteinF:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFOBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-861Glycine maxGmaAffx.60252.1.S1_atBI321448--6e-9At3g12203scpl17 (serine carboxypeptidase-like 17)C.G.S.X.
0.042e-240Hordeum vulgareContig17621_atContig17621--1e-1At1g73310scpl4 (serine carboxypeptidase-like 4)C.G.S.X.
0.041e+036Oryza sativaOsAffx.31157.1.S1_at---0C.G.S.X.
0.096e-1169Populus trichocarpaPtpAffx.221260.1.S1_atpmrna38018--5e-13At3g10450SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7)C.G.S.X.
0.022e-138Triticum aestivumTa.10329.13.S1_a_atBJ217006--7e-24At5g59690histone H4C.G.S.X.
0.129e-1373Vitis vinifera1607463_atCB343440hypothetical protein LOC100255717-1e-12At3g12203scpl17 (serine carboxypeptidase-like 17)C.G.S.X.
0.023e-446Zea maysZm.3150.1.S1_atBM080786hypothetical protein LOC100216996-1e-3At3g12203scpl17 (serine carboxypeptidase-like 17)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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