Gene omics information

Query gene ID At3g11410
Gene name PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g11410820314PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.S.X.H.G.
0.2624.4At1g73390843674-F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PFMS.X.H.G.
0.2624.4At4g26080828714ABI1 (ABA INSENSITIVE 1)Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure.S.X.H.G.
0.2319.3At4g13010826914oxidoreductase, zinc-binding dehydrogenase family proteinF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast thylakoid membrane, chloroplast, plasma membrane, vacuole;BOFMPAVS.X.H.G.
0.2217.5At5g13760831221unknown proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;PMOFVBAS.X.H.G.
0.2115.8At1g01240839274unknown proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;PMBOS.X.H.G.
0.2115.8At5g07250830616ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)F:molecular_function unknown;P:unknown;C:integral to membrane;BOMPFAS.X.H.G.
0.1912.7At1g19310838513zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVBS.X.H.G.
0.1912.7At3g53000824466AtPP2-A15 (Phloem protein 2-A15)F:carbohydrate binding;P:N-terminal protein myristoylation;C:cellular_component unknown;PS.X.H.G.
0.168.8At1g49300841353RABG3E (RAB GTPASE HOMOLOG G3E)encodes a small GTPase involved in membrane trafficking. Gene expression is induced by hydrogen peroxide and lines. Lines overexpressing the gene are more tolerant to high salt and hyperosmotic conditions.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.899.7GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
33.299.7GSM268249dor-drought-2, biological rep 2GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
31.399.7GSM142644MC002_ATH1_A8.1-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
29.799.7E-ATMX-35-raw-cel-1574334832
27.899.7GSM38670DSNPGSE2268Arabidopsis polysome microarray
27.299.7GSM131299AtGen_6-2511_Osmoticstress-Shoots-12.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
25.899.7GSM152139Col-0 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
25.699.7GSM170897Col-0 +ABA repl1GSE7112Abscisic acid effect on wild type and the abh1 mutant
25.699.7GSM38671DSPSGSE2268Arabidopsis polysome microarray
25.599.7E-ATMX-35-raw-cel-1574334800
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.072e-1067At1g07430837255protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVC.G.S.X.
0.106e-756At5g59220836040protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBVC.G.S.X.
0.146e-446At2g29380817487protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVC.G.S.X.
0.012e-344At4g17880827511basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOVBC.G.S.X.
0.021e-138At4g01460828089basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFMOC.G.S.X.
0.011e-138At4g17080827416-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPFC.G.S.X.
0.021e-138At3g17250820986protein phosphatase 2C-related / PP2C-relatedF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVAC.G.S.X.
0.016e-136At5g24940832564protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOBFAVC.G.S.X.
0.016e-136At5g45990834639crooked neck protein, putative / cell cycle protein, putativeF:binding;P:RNA processing;C:intracellular;MFOPBAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.256e-859Glycine maxGmaAffx.52826.3.S1_atBF596503--2e-8At3g11410PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)C.G.S.X.
0.025e-342Hordeum vulgareContig17540_atContig17540--5e-1At5g10530lectin protein kinase, putativeC.G.S.X.
0.045e-344Oryza sativaOs05g04572009633.m03549-Protein phosphatase-2C2e-7At1g07430protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.309e-47188Populus trichocarpaPtp.868.1.S1_s_atCK089985hypothetical protein-7e-47At3g11410PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)C.G.S.X.
0.044e-550Triticum aestivumTaAffx.96410.1.S1_atBQ801574--6e-5At3g11410PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)C.G.S.X.
0.212e-22105Vitis vinifera1608189_s_atBQ800538hypothetical protein LOC100247958-1e-21At3g11410PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)C.G.S.X.
0.021e+034Zea maysZm.10292.1.A1_atBM737261--6e-16At2g40860protein kinase family protein / protein phosphatase 2C ( PP2C) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
XGO:0009414A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
XGO:0009409A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
XGO:0009738A series of molecular signals mediated by the detection of abscisic acid.
XGO:0009788Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by abscisic acid.
XGO:0010119Any process that modulates the frequency, rate or extent of stomatal movement.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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