CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g11370

Gene name DC1 domain-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.33 38.1 At3g11370 820309 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PFOM S.X. H.G.
0.75 86.9 At5g41280 834129 - F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;P S.X. H.G.
0.67 81.6 At2g30670 817617 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV S.X. H.G.
0.57 73.8 At3g12230 820403 scpl14 (serine carboxypeptidase-like 14) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB S.X. H.G.
0.50 65.3 At1g29020 839776 calcium-binding EF hand family protein F:calcium ion binding;P:unknown;C:endomembrane system;PMOAF S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
735.1 100.0 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
543.7 100.0 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
142.7 99.9 GSM184479 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
109.0 99.9 GSM184484 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
99.4 99.9 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
90.8 99.9 GSM184488 Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
85.4 99.9 GSM184481 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
83.5 99.9 GSM184478 Lateral Root Cap root cells 2hr KCl control treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
72.7 99.9 GSM184493 Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
71.3 99.9 GSM218596 Whole roots 3.5hr KNO3 treated then frozen, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.57 2e-177 623 At3g11385 2745880 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POBMFV C.G. S.X.
0.60 6e-150 531 At3g11390 820311 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBV C.G. S.X.
0.55 1e-123 444 At3g11402 820312 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVA C.G. S.X.
0.14 5e-33 143 At3g13760 820585 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:membrane;PMO C.G. S.X.
0.19 8e-26 119 At1g35610 840457 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;POM C.G. S.X.
0.29 3e-22 107 At2g17600 816267 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POM C.G. S.X.
0.11 7e-14 79 At5g17960 831663 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POM C.G. S.X.
0.21 6e-11 69 At2g17590 816266 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PFM C.G. S.X.
0.18 3e-10 67 At3g59120 825081 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PMOF C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e+0 34 Glycine max GmaAffx.78794.1.S1_at BQ273147 - - 2e-1 At4g30730 unknown protein C.G. S.X.
0.02 7e+0 32 Hordeum vulgare HU09N18u_s_at HU09N18u - - 2e+0 At1g09370 enzyme inhibitor/ pectinesterase C.G. S.X.
0.02 2e+0 36 Oryza sativa OsAffx.32332.1.A1_at - - - 0 C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.20153.3.S1_at DN490731 hypothetical protein - 1e-18 At2g44530 ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative C.G. S.X.
0.02 1e+1 32 Triticum aestivum TaAffx.92211.1.A1_x_at BJ276129 - - 5e-1 At3g19660 unknown protein C.G. S.X.
0.01 7e-2 38 Vitis vinifera 1618484_at CD719900 - - 6e+0 At5g63870 PP7 (SERINE/THREONINE PHOSPHATASE 7) C.G. S.X.
0.02 4e-1 36 Zea mays ZmAffx.1513.1.S1_at 11990232-53 - - 3e-25 Atcg00750 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage