CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g11080

Gene name AtRLP35 (Receptor Like Protein 35)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.73 85.5 At3g11080 820279 AtRLP35 (Receptor Like Protein 35) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAV S.X. H.G.
0.36 43.6 At1g12290 837783 disease resistance protein (CC-NBS-LRR class), putative F:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response;C:unknown;PMBOFAV S.X. H.G.
0.36 43.6 At2g25440 817082 AtRLP20 (Receptor Like Protein 20) F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAV S.X. H.G.
0.23 19.3 At4g25070 828610 unknown protein F:unknown;P:unknown;C:unknown;MOBFPAV S.X. H.G.
0.13 5.8 At2g16870 816188 disease resistance protein (TIR-NBS-LRR class), putative F:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
499.3 100.0 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
497.9 100.0 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
477.7 100.0 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
217.2 100.0 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
214.0 100.0 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
193.2 100.0 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
146.1 99.9 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
137.8 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
134.8 99.9 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
118.4 99.9 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.80 0 1548 At5g27060 832764 AtRLP53 (Receptor Like Protein 53) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV C.G. S.X.
0.62 0 1148 At3g28890 822523 AtRLP43 (Receptor Like Protein 43) F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAV C.G. S.X.
0.82 0 1134 At3g11010 820272 AtRLP34 (Receptor Like Protein 34) F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAV C.G. S.X.
0.55 0 648 At3g05660 819733 AtRLP33 (Receptor Like Protein 33) F:protein binding, kinase activity;P:signal transduction, defense response;C:chloroplast;PMOBFAV C.G. S.X.
0.59 9e-113 408 At3g05650 819732 AtRLP32 (Receptor Like Protein 32) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV C.G. S.X.
0.47 6e-83 309 At2g15080 815997 AtRLP19 (Receptor Like Protein 19) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV C.G. S.X.
0.27 3e-57 224 At5g25910 832660 AtRLP52 (Receptor Like Protein 52) putative disease resistance protein induced by chitin oligomers. C.G. S.X.
0.13 2e-12 75 At1g45616 841101 AtRLP6 (Receptor Like Protein 6) F:protein binding;P:signal transduction, defense response;C:membrane;PMOBFAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e-1 38 Glycine max GmaAffx.49960.1.S1_at BG507334 - - 2e-1 At5g66090 unknown protein C.G. S.X.
0.01 2e-1 38 Hordeum vulgare Contig21486_at Contig21486 - - 5e-3 At5g55430 unknown protein C.G. S.X.
0.01 7e-1 38 Oryza sativa Os01g0160200 AK073444.1 - Leucine-rich repeat, plant specific containingprotein 4e-1 At3g11080 AtRLP35 (Receptor Like Protein 35) C.G. S.X.
0.01 1e-1 40 Populus trichocarpa PtpAffx.200709.1.S1_at pmrna1367 hypothetical protein - 1e-2 At3g55646 unknown protein C.G. S.X.
0.01 2e+0 36 Triticum aestivum TaAffx.110626.1.S1_at CA656896 - - 1e-3 At4g08570 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1609869_at CA815742 hypothetical protein LOC100253108 - 5e-6 At1g51560 FMN binding C.G. S.X.
0.01 2e+0 34 Zea mays Zm.8741.1.A1_at BM349488 - - 1e+0 At3g16330 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0007165 The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
C GO:0006952 Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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