CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g11010

Gene name AtRLP34 (Receptor Like Protein 34)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.36 43.6 At3g11010 820272 AtRLP34 (Receptor Like Protein 34) F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAV S.X. H.G.
0.89 94.6 At1g21240 838719 WAK3 (wall associated kinase 3) encodes a wall-associated kinase S.X. H.G.
0.80 89.8 At4g04500 825780 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.53 68.6 At4g23140 828413 CRK6 (CYSTEINE-RICH RLK 6) Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) S.X. H.G.
0.50 65.3 At3g25010 822092 AtRLP41 (Receptor Like Protein 41) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV S.X. H.G.
0.46 59.8 At4g23150 828414 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
137.6 99.9 GSM133819 Yang_1-4_old-pod_Rep2_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
106.8 99.9 GSM133037 2508 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
73.3 99.9 GSM133050 2791 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
69.5 99.9 GSM133064 2528 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
68.4 99.9 GSM133051 2793 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
65.1 99.8 GSM133821 Yang_1-6_old-pod_Rep3_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
63.7 99.8 GSM142811 SS002_ATH1_A3-smith-02h GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
58.6 99.8 GSM133048 2790 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
55.5 99.8 E-MEXP-173-raw-cel-357965452
51.5 99.8 GSM133046 2788 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.88 0 2605 At5g27060 832764 AtRLP53 (Receptor Like Protein 53) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV C.G. S.X.
0.72 0 1746 At3g28890 822523 AtRLP43 (Receptor Like Protein 43) F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAV C.G. S.X.
0.79 0 1134 At3g11080 820279 AtRLP35 (Receptor Like Protein 35) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAV C.G. S.X.
0.55 4e-164 579 At3g05660 819733 AtRLP33 (Receptor Like Protein 33) F:protein binding, kinase activity;P:signal transduction, defense response;C:chloroplast;PMOBFAV C.G. S.X.
0.55 6e-80 299 At3g05650 819732 AtRLP32 (Receptor Like Protein 32) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV C.G. S.X.
0.43 1e-71 272 At2g15080 815997 AtRLP19 (Receptor Like Protein 19) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV C.G. S.X.
0.27 7e-55 216 At5g25910 832660 AtRLP52 (Receptor Like Protein 52) putative disease resistance protein induced by chitin oligomers. C.G. S.X.
0.07 2e-12 75 At1g47890 841206 AtRLP7 (Receptor Like Protein 7) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-3 46 Glycine max GmaAffx.85438.1.S1_at BU764113 - - 3e+0 At4g02360 unknown protein C.G. S.X.
0.01 2e-1 38 Hordeum vulgare Contig22516_at Contig22516 - - 4e-1 At1g51300 acyl-protein thioesterase-related C.G. S.X.
0.01 7e-1 38 Oryza sativa Os01g0293600 NM_183632.1 - HAT dimerisation domain containing protein 1e+0 At4g09660 - C.G. S.X.
0.01 1e-1 40 Populus trichocarpa PtpAffx.206881.1.S1_at pmrna13663 hypothetical protein - 4e-2 At1g07870 protein kinase family protein C.G. S.X.
0.01 1e+0 36 Triticum aestivum TaAffx.110054.1.S1_at CA664703 - - 1e+0 At2g40745 unknown protein C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1613994_at BQ794302 hypothetical protein LOC100260766 - 6e-21 At2g31090 unknown protein C.G. S.X.
0.01 6e-1 36 Zea mays Zm.11250.1.A1_at BM341159 hypothetical protein LOC100273841 - 3e-1 At5g07560 GRP20 (GLYCINE-RICH PROTEIN 20) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0007165 The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
C GO:0006952 Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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