Gene omics information

Query gene ID At3g09260
Gene name PYK10
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g09260820082PYK10Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.S.X.H.G.
1.00100.0At3g16420820890PBP1 (PYK10-BINDING PROTEIN 1)The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests.S.X.H.G.
0.9296.0At3g15950820839NAI2Similar to TSK-associating protein 1 (TSA1), contains 10 EFE repeats, a novel repeat sequence unique to plants. Expressed preferentially in the roots.Protein is localized to ER bodies- an endoplasmic reticulum derived structure. Loss of function mutations lack ER bodies.S.X.H.G.
0.8693.1At3g16460820894jacalin lectin family proteinF:copper ion binding;P:response to cold;C:cytosol, nucleus, membrane;BOMPFVAS.X.H.G.
0.8391.4At3g16390820886NSP3 (NITRILE SPECIFIER PROTEIN 3)Encodes a nitrile-specifier protein NSP3. NSP3 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.S.X.H.G.
0.8391.4At3g16450820893jacalin lectin family proteinF:molecular_function unknown;P:response to cold;C:nucleus;POS.X.H.G.
0.8089.8At3g20370821582meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PMOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.699.6E-MEXP-828-raw-cel-1156922553
14.799.4GSM291128root - 08% oxygen - 48h - BGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
14.599.4GSM157338Coates_1-10_ara1OX_Rep3_ATH1GSE6826Identification of candidate Arabidillo target genes in Arabidopsis
13.099.4E-MEXP-828-raw-cel-1156922572
12.099.3E-MEXP-828-raw-cel-1156922595
11.699.3E-NASC-78-raw-cel-1463195203
11.599.3GSM291118root - 21% oxygen - 48h - BGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.199.2E-MEXP-828-raw-cel-1156922891
11.099.2GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
10.999.2E-MEXP-828-raw-cel-1156922659
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.764e-157555At1g66280842945BGLU22F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:membrane;BOPMFAC.G.S.X.
0.779e-155547At1g66270842944BGLU21F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFAC.G.S.X.
0.713e-120432At5g28510832944BGLU24 (BETA GLUCOSIDASE 24)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAC.G.S.X.
0.222e-41171At1g75940843927ATA27encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.C.G.S.X.
0.267e-23109At3g21370821691BGLU19 (BETA GLUCOSIDASE 19)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAC.G.S.X.
0.253e-22107At1g52400841670BGLU18 (BETA GLUCOSIDASE 18)encodes a member of glycosyl hydrolase family 1, located in inducible ER bodies which were formed after wounding, required in inducible ER body formationC.G.S.X.
0.126e-1169At5g48175834870unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-346Glycine maxGmaAffx.92564.1.S1_atCF808289--4e-5At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.022e+034Hordeum vulgareHVSMEb0010E16r2_s_atHVSMEb0010E16r2very long chain fatty acid condensing enzyme CUT1;1-like-1e+1At4g11190disease resistance-responsive family protein / dirigent family proteinC.G.S.X.
0.054e-448Oryza sativaOs06g03202009634.m02112-Beta-primeverosidase (EC 3.2.1.149)2e-4At3g09260PYK10C.G.S.X.
0.092e-552Populus trichocarpaPtpAffx.200540.1.S1_s_atpmrna1075hypothetical protein-2e-6At5g54570BGLU41 (BETA GLUCOSIDASE 41)C.G.S.X.
0.023e+034Triticum aestivumTaAffx.82691.1.S1_s_atCA668498--1e-2At2g32460MYB101C.G.S.X.
0.022e-136Vitis vinifera1620808_atAY039034.1beta-glucosidase-4e-10At1g26560BGLU40 (BETA GLUCOSIDASE 40)C.G.S.X.
0.021e+034Zea maysZm.16532.1.A1_a_atBM07477060S ribosomal protein L18a-5e-44At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
XGO:0009610A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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