Gene omics information

Query gene ID At3g07900
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At3g07900819981unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
1.00100.0At1g52660841698ATP bindingF:ATP binding;P:defense response, apoptosis;C:unknown;PBOAMS.X.H.G.
1.00100.0At3g21340821688leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.6176.7At1g63450842651catalyticF:catalytic activity;P:unknown;C:membrane;POMS.X.H.G.
0.5773.8At1g16440838214kinaseF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MOPFBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
247.5100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
209.2100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
153.899.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
142.599.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
131.399.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
129.399.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
126.199.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
119.699.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
118.299.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
115.799.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.182e-1791At2g44500819057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POC.G.S.X.
0.016e-240At4g39870830146-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVC.G.S.X.
0.026e-240At4g21970828286unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e-138At4g25210828624transcription regulatorF:transcription regulator activity;P:biological_process unknown;C:nucleolus, chloroplast;OMFBPVAC.G.S.X.
0.012e-138At3g55660824732ROPGEF6Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.C.G.S.X.
0.022e-138At1g72740843606DNA-binding family protein / histone H1/H5 family proteinF:transcription factor activity;P:nucleosome assembly, regulation of transcription;C:nucleus;PMFOC.G.S.X.
0.012e-138At1g21890838791nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BPOAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.172e-1585Glycine maxGma.1607.1.S1_atAW310623--6e-16At3g07900unknown proteinC.G.S.X.
0.014e-136Hordeum vulgareContig13480_atContig13480--1e-10At5g59570myb family transcription factorC.G.S.X.
0.014e-138Oryza sativaOs03g0146200AK110727.1--2e-28At3g26520TIP2 (TONOPLAST INTRINSIC PROTEIN 2)C.G.S.X.
0.222e-21105Populus trichocarpaPtp.1577.1.S1_atDN484253hypothetical protein-8e-22At3g07900unknown proteinC.G.S.X.
0.024e+034Triticum aestivumTa.2816.2.S1_a_atCA747268--4e+0At4g18650transcription factor-relatedC.G.S.X.
0.223e-22105Vitis vinifera1611059_atCB920804--8e-22At3g07900unknown proteinC.G.S.X.
0.014e-136Zea maysZm.12913.1.A1_atCA404150hypothetical protein LOC100194064-3e-6At5g50840-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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