Gene omics information

Query gene ID At3g05790
Gene name LON4 (LON PROTEASE 4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g05790819748LON4 (LON PROTEASE 4)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.S.X.H.G.
0.5673.0At1g48390841259syntaxin-related family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5368.6At5g61400836261pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAS.X.H.G.
0.5267.4At4g17380827450MSH4 (MUTS HOMOLOG 4)Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination.S.X.H.G.
0.5065.3At1g09470837470unknown proteinF:molecular_function unknown;P:unknown;C:unknown;MOBFPAVS.X.H.G.
0.5065.3At1g65110842818ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;PMOFBS.X.H.G.
0.4862.5At2g42370818838unknown proteinF:unknown;P:unknown;C:cellular_component unknown;MOPBFAS.X.H.G.
0.4862.5At4g05340825882ATP bindingF:ATP binding;P:biological_process unknown;C:cellular_component unknown;PFMOBVS.X.H.G.
0.4659.8At4g26020828708-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVS.X.H.G.
0.4659.8At3g45490823689-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
633.3100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
356.2100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
329.3100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
250.0100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
243.2100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
228.9100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
213.3100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
212.7100.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
211.4100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
189.5100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7501106At3g05780819747LON3 (LON PROTEASE 3)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.C.G.S.X.
0.690884At5g26860832744LON1 (LON PROTEASE 1)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.C.G.S.X.
0.066e-963At1g07190837230-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFOC.G.S.X.
0.014e-138At5g47040834750LON2 (LON PROTEASE 2)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.C.G.S.X.
0.014e-138At2g41360818734-F:molecular_function unknown;P:biological_process unknown;C:unknown;PMC.G.S.X.
0.011e+036At5g47400834787unknown proteinF:molecular_function unknown;P:unknown;C:endomembrane system;MPOC.G.S.X.
0.011e+036At4g15390827205transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.011e+036At3g58830825052haloacid dehalogenase (HAD) superfamily proteinF:catalytic activity;P:unknown;C:chloroplast;BOFPC.G.S.X.
0.001e+036At3g59100825079ATGSL11 (glucan synthase-like 11)encodes a protein similar to callose synthaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-450Glycine maxGmaAffx.87268.2.S1_atBM308386--3e-15At5g26860LON1 (LON PROTEASE 1)C.G.S.X.
0.053e-344Hordeum vulgarerbags20m01_atrbags20m01--6e-9At5g26860LON1 (LON PROTEASE 1)C.G.S.X.
0.213e-37159Oryza sativaOs07g0689300CB664391-Mitochondrial ATP-dependent protease Lon precursor2e-52At5g26860LON1 (LON PROTEASE 1)C.G.S.X.
0.072e-1999Populus trichocarpaPtpAffx.37347.1.A1_atCV255651hypothetical protein-2e-39At3g05780LON3 (LON PROTEASE 3)C.G.S.X.
0.173e-1171Triticum aestivumTa.10141.1.S1_atBJ214812--6e-11At5g26860LON1 (LON PROTEASE 1)C.G.S.X.
0.014e-136Vitis vinifera1614143_atCF203371.1--7e-1At4g38840auxin-responsive protein, putativeC.G.S.X.
0.231e-26121Zea maysZm.1010.1.A1_atU85495.1LON2 protein-4e-20At5g26860LON1 (LON PROTEASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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