Gene omics information

Query gene ID At3g05170
Gene name phosphoglycerate/bisphosphoglycerate mutase family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At3g05170819681phosphoglycerate/bisphosphoglycerate mutase family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;BFOPMAS.X.H.G.
0.8693.1At1g64060842710ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.S.X.H.G.
0.6781.6At4g40010830162SNRK2.7 (SNF1-RELATED PROTEIN KINASE 2.7)encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.S.X.H.G.
0.2930.3At3g54390824605transcription factorF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBFOMS.X.H.G.
0.157.8At4g36920829845AP2 (APETALA 2)Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
499.4100.0GSM284396Arabidopsis GPSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
180.0100.0GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
90.099.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.141e-1067At1g08940837415phosphoglycerate/bisphosphoglycerate mutase family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;BFOPAMC.G.S.X.
0.013e-240At3g57430824910pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:chloroplast;POFMBC.G.S.X.
0.015e-136At5g45260834562RRS1 (RESISTANT TO RALSTONIA SOLANACEARUM 1)Confers resistance to Ralstonia solanacearum. Similar to NBLS-TIR resistance genes,and also contains similarity to transcription factors. Interacts with pathogen effector protein AvrPop2.C.G.S.X.
0.015e-136At5g61820836304-F:molecular_function unknown;P:biological_process unknown;C:vacuole;POC.G.S.X.
0.015e-136At4g08450826403disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;BPOMFVAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxHgAffx.19645.1.S1_atCA939535--4e+0At5g14000anac084 (Arabidopsis NAC domain containing protein 84)C.G.S.X.
0.029e-134Hordeum vulgareHI04D10u_atHI04D10u--7e-42At5g0296040S ribosomal protein S23 (RPS23B)C.G.S.X.
0.082e-757Oryza sativaOs05g0141700AK065644.1-Phosphoglycerate/bisphosphoglycerate mutase familyprotein4e-8At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinC.G.S.X.
0.167e-756Populus trichocarpaPtpAffx.222762.1.S1_atpmrna40401hypothetical protein-4e-7At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinC.G.S.X.
0.038e+032Triticum aestivumTaAffx.25726.1.S1_atCA696753--2e+0At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinC.G.S.X.
0.039e+030Vitis vinifera1620158_atCD006392--1e+0At4g04953unknown proteinC.G.S.X.
0.053e-652Zea maysZm.13814.1.S1_atAY104654.1hypothetical protein LOC100273186-1e-5At1g08940phosphoglycerate/bisphosphoglycerate mutase family proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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