Gene omics information

Query gene ID At3g05030
Gene name NHX2 (SODIUM HYDROGEN EXCHANGER 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At3g05030819665NHX2 (SODIUM HYDROGEN EXCHANGER 2)member of Sodium proton exchanger familyS.X.H.G.
0.4761.2At4g33925829537unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPAOFS.X.H.G.
0.4050.8At5g35930833582AMP-dependent synthetase and ligase family proteinF:phosphopantetheine binding, acyl carrier activity, catalytic activity, AMP binding, cofactor binding;P:metabolic process;C:cellular_component unknown;BOFMPAS.X.H.G.
0.3846.7At4g18465827579RNA helicase, putativeF:RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;BMOFVPAS.X.H.G.
0.3338.1At2g34980818062SETH1Encodes a putative phosphatidylinositol-glycan synthase subunit C gene. It is involved in the first step of the glycosylphosphatidylinositol (GPI) biosynthetic pathway.S.X.H.G.
0.3032.1At3g56820824849unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.2420.7At3g16200820866unknown proteinF:molecular_function unknown;P:biological_process unknown;C:Golgi apparatus;OPBS.X.H.G.
0.146.8At5g10910830958mraW methylase family proteinF:methyltransferase activity;P:unknown;C:unknown;BOMPS.X.H.G.
0.135.8At1g80870844427protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
384.2100.0GSM133760Lindsey_1-12_heart-stage-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
69.899.9E-MEXP-1443-raw-cel-1581869573
25.599.7GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
23.999.6GSM242953Mock day 1 (day1E1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
23.399.6E-MEXP-509-raw-cel-829148703
22.799.6GSM131672ATGE_48_CGSE5633AtGenExpress: Developmental series (shoots and stems)
21.999.6GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
21.399.6GSM131670ATGE_48_AGSE5633AtGenExpress: Developmental series (shoots and stems)
20.499.6GSM38668NSNPGSE2268Arabidopsis polysome microarray
20.099.6GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7301108At5g27150832773NHX1 (NA+/H+ EXCHANGER)Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development.C.G.S.X.
0.321e-1895At3g06370819811NHX4 (SODIUM HYDROGEN EXCHANGER 4)member of Sodium proton exchanger familyC.G.S.X.
0.126e-859At5g55470835640ATNHX3member of Sodium proton exchanger familyC.G.S.X.
0.022e-138At4g17990827524unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.018e-136At5g46510834694disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFVAC.G.S.X.
0.018e-136At5g46520834695ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptorF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFVAC.G.S.X.
0.018e-136At4g30130829136unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PMFC.G.S.X.
0.018e-136At3g20780821626ATTOP6B (topoisomerase 6 subunit B)Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.212e-23111Glycine maxGmaAffx.70783.1.S1_atBQ612167sodium/proton antiporter-2e-17At5g27150NHX1 (NA+/H+ EXCHANGER)C.G.S.X.
0.104e-446Hordeum vulgareContig20706_atContig20706Na /H antiporter-3e-4At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)C.G.S.X.
0.271e-32143Oryza sativaOs07g0666900AY324877.1-Na/H antiporter Nhx17e-33At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)C.G.S.X.
0.517e-67256Populus trichocarpaPtpAffx.222733.1.S1_s_atpmrna40344sodium proton exchanger-5e-67At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)C.G.S.X.
0.139e-41169Triticum aestivumTa.24748.1.S1_atAY040246.2Na+/H+ antiporter-4e-44At5g27150NHX1 (NA+/H+ EXCHANGER)C.G.S.X.
0.291e-61236Vitis vinifera1622021_atCF209010hypothetical protein LOC100259022-3e-61At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)C.G.S.X.
0.232e-1169Zea maysZm.14982.1.S1_atAY270037.1Na+/H+ antiporter NHX2-6e-11At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006814The directed movement of sodium ions (Na+) into, out of, within or between cells.
LGO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.
LGO:0006885Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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