Gene omics information

Query gene ID At3g04570
Gene name DNA-binding protein-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.157.8At3g04570819613DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:unknown;BPMOFVAS.X.H.G.
0.5065.3At1g31060839992unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.3643.6At3g62040825377catalytic/ hydrolaseF:hydrolase activity, catalytic activity;P:metabolic process;C:unknown;OBPFAS.X.H.G.
0.1912.7At5g22890832353zinc finger (C2H2 type) family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:intracellular;MOPFS.X.H.G.
0.124.9At3g26470822252-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
100.799.9GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
80.999.9GSM260878A1-Greco-BouGSE10322Higher order transcriptional regulation conferred by the bountiful gain of function mutant
47.499.8GSM133959Fukuda_1-4_2B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
44.199.8GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
41.799.8GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
37.899.8GSM133958Fukuda_1-3_2A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
37.899.8GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
37.799.7GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
35.799.7GSM291098root - 08% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
34.299.7GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.111e-1687At2g45430819151DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:unknown;PMFBOC.G.S.X.
0.208e-1271At4g14465827093DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMC.G.S.X.
0.053e-859At4g17800827502DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;PBMOFC.G.S.X.
0.135e-756At1g76500843983SOB3 (SUPPRESSOR OF PHYB-4#3)Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to lightC.G.S.X.
0.112e-654At3g60870825258DNA-binding protein-relatedF:unknown;P:unknown;C:unknown;PBC.G.S.X.
0.048e-652At4g35390829692AGF1 (AT-hook protein of GA feedback 1)F:transcription factor activity;P:negative regulation of gibberellic acid mediated signaling;C:nucleus;POBMFAVC.G.S.X.
0.075e-446At3g55560824721AGF2 (AT-hook protein of GA feedback 2)F:unknown;P:biological_process unknown;C:chloroplast;PMBOFC.G.S.X.
0.125e-446At1g20900838683ESC (ESCAROLA)Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light.C.G.S.X.
0.022e-344At5g493503771473unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-138Glycine maxGmaAffx.69688.5.S1_atBQ785367--9e-2At3g04570DNA-binding protein-relatedC.G.S.X.
0.039e-134Hordeum vulgareHD08F08r_atHD08F08r--7e-1At5g26673-C.G.S.X.
0.104e-344Oryza sativaOs02g08208009630.m05730-Protein of unknown function DUF296 domaincontaining protein3e-2At4g14465DNA-binding protein-relatedC.G.S.X.
0.121e-861Populus trichocarpaPtpAffx.205903.1.S1_atpmrna11702hypothetical protein-4e-9At3g04570DNA-binding protein-relatedC.G.S.X.
0.031e-138Triticum aestivumTa.29551.1.A1_atCA719367--4e-3At5g27520PNC2 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 2)C.G.S.X.
0.056e-1373Vitis vinifera1621103_atCB003423--2e-12At3g04570DNA-binding protein-relatedC.G.S.X.
0.032e-136Zea maysZm.3428.1.A1_atAI964613loricrin-2e+0At4g33560unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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