Gene omics information

Query gene ID At3g03680
Gene name C2 domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g03680821190C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPFVAS.X.H.G.
0.2217.5At4g32730829409PC-MYB1Encodes a putative c-myb-like transcription factor with three MYB repeats.S.X.H.G.
0.1710.2At3g49500824112RDR6 (RNA-DEPENDENT RNA POLYMERASE 6)Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.S.X.H.G.
0.1710.2At5g48520834908unknown proteinF:molecular_function unknown;P:biological_process unknown;C:nucleus;MOPFBS.X.H.G.
0.051.1At1g78810844217unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFS.X.H.G.
0.051.1At5g11040830971-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
114.599.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
77.999.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
57.499.8E-MEXP-1443-raw-cel-1581869573
54.499.8E-MEXP-1443-raw-cel-1581869515
48.499.8GSM265419Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
45.199.8GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
41.899.8GSM232886Wt.4-3.90GSE9201Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5
38.399.8GSM265418Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
38.099.8GSM216981Vector_shoots_4h_GA4+DEX_repl2GSE8741DELLA protein direct targets in Arabidopsis
36.399.7GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.047e-1273At5g48060834858C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFC.G.S.X.
0.091e-759At3g57880824957C2 domain-containing proteinF:molecular_function unknown;P:tryptophan biosynthetic process;C:endoplasmic reticulum, cell wall;MPOFC.G.S.X.
0.054e-757At1g51570841582C2 domain-containing proteinF:unknown;P:tryptophan biosynthetic process;C:endoplasmic reticulum, cell wall;MPOFC.G.S.X.
0.042e-656At1g74720843811C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFBVAC.G.S.X.
0.047e-654At5g12970831137C2 domain-containing proteinF:molecular_function unknown;P:tryptophan biosynthetic process;C:cellular_component unknown;MPOFC.G.S.X.
0.023e-552At4g20080827753C2 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;PMOFC.G.S.X.
0.063e-552At1g22610838867C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPOFC.G.S.X.
0.053e-552At1g04150839249C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVC.G.S.X.
0.034e-448At4g11610826766C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-138Glycine maxGmaAffx.75223.1.S1_atAI496024--1e-2At2g22000PROPEP6 (Elicitor peptide 6 precursor)C.G.S.X.
0.015e-240Hordeum vulgareContig13100_atContig13100--8e-33At1g51570C2 domain-containing proteinC.G.S.X.
0.022e-759Oryza sativaOs04g0472900AK110053.1-C2 calcium/lipid-binding region, CaLB domaincontaining protein9e-2At1g22610C2 domain-containing proteinC.G.S.X.
0.251e-47192Populus trichocarpaPtpAffx.211103.1.S1_atpmrna21812hypothetical protein-1e-47At3g03680C2 domain-containing proteinC.G.S.X.
0.011e-140Triticum aestivumTa.13103.1.A1_atCD491177--6e+0At5g45450iron transporter-relatedC.G.S.X.
0.037e-342Vitis vinifera1621707_atCF512906hypothetical protein LOC100252023-1e-49At3g57880C2 domain-containing proteinC.G.S.X.
0.014e-240Zea maysZm.6393.4.A1_a_atBQ048072H1 histone-4e+0At4g33710pathogenesis-related protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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