Gene omics information

Query gene ID At3g03380
Gene name DegP7 (DegP protease 7)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At3g03380821268DegP7 (DegP protease 7)Encodes a putative DegP protease.S.X.H.G.
0.8994.6At4g24520828554ATR1 (ARABIDOPSIS P450 REDUCTASE 1)Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.S.X.H.G.
0.6781.6At5g19330832053armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing proteinF:protein binding, binding;P:unknown;C:plasma membrane;MPOFVBAS.X.H.G.
0.5570.6At1g15750838144TPL (TOPLESS)Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.S.X.H.G.
0.4050.8At5g41940834199RabGAP/TBC domain-containing proteinF:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular;MOFPBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.199.4GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.499.2GSM133892Schroeder_1-6_JS43-control-96h_Rep1_ATH1GSE5744Response to potassium starvation in roots
9.599.1GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
8.999.0GSM265473Arabidopsis, whole roots, -Fe, 72 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
8.098.9GSM133894Schroeder_1-12_JS44-starve-96h_Rep1_ATH1GSE5744Response to potassium starvation in roots
7.498.8GSM265412Arabidopsis, whole roots, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
7.098.7GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
6.798.7GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
6.698.7GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
6.498.6GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-759At3g03370821271-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.011e-140At5g58480835961glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PFOC.G.S.X.
0.011e-140At1g20760838666calcium-binding EF hand family proteinF:calcium ion binding;P:unknown;C:plasma membrane;MBOFPVAC.G.S.X.
0.014e-138At5g12460831121-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PFMOC.G.S.X.
0.012e+036At5g55610835655unknown proteinF:unknown;P:unknown;C:mitochondrion, chloroplast, plastid, membrane;PC.G.S.X.
0.012e+036At3g47090823862leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:chloroplast;MPOBFVAC.G.S.X.
0.012e+036At3g21140821666FMN bindingF:FMN binding;P:unknown;C:chloroplast;BOPMC.G.S.X.
0.012e+036At1g66730842991ATP dependent DNA ligase family proteinF:DNA binding, DNA ligase (ATP) activity, ATP binding;P:DNA repair, DNA replication, DNA recombination;C:chloroplast;BOMFAVPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.172e-28129Glycine maxGma.8288.1.S1_atBU550070--6e-29At3g03380DegP7 (DegP protease 7)C.G.S.X.
0.151e-1481Hordeum vulgareContig7623_atContig7623--3e-14At3g03380DegP7 (DegP protease 7)C.G.S.X.
0.172e-1069Oryza sativaOs02g0712000AK065045.1-PDZ/DHR/GLGF domain containing protein1e-10At3g03380DegP7 (DegP protease 7)C.G.S.X.
0.226e-41171Populus trichocarpaPtpAffx.203973.1.S1_atpmrna7836hypothetical protein-4e-41At3g03380DegP7 (DegP protease 7)C.G.S.X.
0.091e-450Triticum aestivumTa.24767.1.S1_atCD894586--5e-5At3g03380DegP7 (DegP protease 7)C.G.S.X.
0.282e-89329Vitis vinifera1610831_atCB976031hypothetical protein LOC100255257-4e-89At3g03380DegP7 (DegP protease 7)C.G.S.X.
0.091e-552Zea maysZmAffx.452.1.A1_atAI677152--3e-6At3g03380DegP7 (DegP protease 7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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