Gene omics information

Query gene ID At3g03200
Gene name anac045 (Arabidopsis NAC domain containing protein 45)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g03200821226anac045 (Arabidopsis NAC domain containing protein 45)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POVMBS.X.H.G.
1.00100.0At1g61760842473harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
1.00100.0At2g14620815950xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBOS.X.H.G.
1.00100.0At3g18670821398ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPBFAVS.X.H.G.
1.00100.0At5g25370832609PLDALPHA3 (PHOSPHLIPASE D ALPHA 3)member of C2-PLD subfamily. Analyses on the gene structures/sequences, overall amino acid sequences, and domain structures indicate that PLDalpha3 is most closely related to other two PLDalphas than to other PLDs. Phylogenetic analysis has not identified a true ortholog for PLDalpha3. Involved in hyperosmotic response.S.X.H.G.
1.00100.0At5g48690834927-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAS.X.H.G.
1.00100.0At5g67050836840lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:membrane;OPBFMVS.X.H.G.
0.9998.1At1g77700844106pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:cellular_component unknown;PFMBOVS.X.H.G.
0.9998.1At2g34530818016unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9998.1At3g10680820237heat shock protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1821.3100.0GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
999.3100.0GSM184905Arabidopsis, root cells, protophloem, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
761.7100.0GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
687.6100.0GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
220.4100.0GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
202.3100.0GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
34.399.7GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
27.799.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.599.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.499.6GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.411e-119430At5g17260831591anac086 (Arabidopsis NAC domain containing protein 86)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POC.G.S.X.
0.142e-23111At1g65910842903anac028 (Arabidopsis NAC domain containing protein 28)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POMC.G.S.X.
0.073e-963At3g17730821041anac057 (Arabidopsis NAC domain containing protein 57)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PC.G.S.X.
0.031e-861At3g15510820790ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.C.G.S.X.
0.095e-550At5g39610833957ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6)Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.C.G.S.X.
0.052e-448At5g07680830661ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.082e-448At5g61430836264ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.052e-448At5g53950835478CUC2 (CUP-SHAPED COTYLEDON 2)Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.066e-240Glycine maxGmaAffx.90496.1.S1_s_atCF806221NAC domain protein NAC3-5e-15At4g27410RD26 (RESPONSIVE TO DESICCATION 26)C.G.S.X.
0.043e-136Hordeum vulgareContig5723_atContig5723--5e-3At3g15170CUC1 (CUP-SHAPED COTYLEDON1)C.G.S.X.
0.072e-1895Oryza sativaOs.45958.1.S1_at---0C.G.S.X.
0.215e-24113Populus trichocarpaPtpAffx.204011.1.S1_x_atpmrna7905NAC domain protein, IPR003441-6e-11At5g17260anac086 (Arabidopsis NAC domain containing protein 86)C.G.S.X.
0.042e-448Triticum aestivumTa.5367.2.S1_x_atCA731144NAC domain transcription factor-1e+0At1g01720ATAF1C.G.S.X.
0.045e-238Vitis vinifera1609555_atCD719835hypothetical protein LOC100261123-2e-30At5g08790ATAF2C.G.S.X.
0.031e+034Zea maysZm.10172.1.A1_atCO532781hypothetical protein LOC100273092-2e-1At1g01720ATAF1C.G.S.X.
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Biological processes



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ECCGO IDProcess Name
CGO:0007275The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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