Gene omics information

Query gene ID At3g02570
Gene name MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g02570820656MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)Encodes a protein with phosphomannose isomerase activity.S.X.H.G.
0.3948.4At1g06510837162unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BMOFPAVS.X.H.G.
0.3643.6At5g49940835057NFU2 (NIFU-LIKE PROTEIN 2)Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast.S.X.H.G.
0.3541.6At4g09620826547-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POS.X.H.G.
0.3541.6At1g70730843410phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putativeF:intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity;P:response to cadmium ion, carbohydrate metabolic process;C:cytosol, nucleus, plasma membrane;BOMFPAS.X.H.G.
0.3541.6At1g69390843271ATMINE1 (Arabidopsis homologue of bacterial MinE 1)Encodes an Arabidopsis homologue of the bacterial MinE topological specificity factor ensuring correct division site placement. It is an essential integral component of the plastid division machinery.S.X.H.G.
0.3133.8At1g72180843550leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.2930.3At1g50170841439ATSIRB (ARABIDOPSIS THALIANA SIROHYDROCHLORIN FERROCHELATASE B)encodes sirohydrochlorin ferrochelatase catalyzing the last step of the siroheme biosynthesisS.X.H.G.
0.2930.3At3g58010824970unknown proteinF:unknown;P:biological_process unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule;PFOS.X.H.G.
0.2830.3At1g02560839433CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5)One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.299.7GSM1330522795GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
23.799.6E-ATMX-35-raw-cel-1574334832
23.699.6GSM128723Pieterse_1-9_Prapae-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attack
21.499.6GSM131129AtGen_B-15_2-1-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
20.099.6GSM1330682530GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
19.299.6GSM1330552797GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
19.199.6E-MEXP-449-raw-cel-676423253
18.799.5GSM131135AtGen_B-21_2-7-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
18.599.5GSM1330532794GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
17.499.5E-ATMX-35-raw-cel-1574334816
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.077e-446At1g67070843027DIN9 (DARK INDUCIBLE 9)Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.C.G.S.X.
0.016e-136At5g58120835924disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.016e-136At3g13610820564oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, dioxygenase activity;P:coumarin biosynthetic process, response to cyclopentenone, hydrogen peroxide-mediated programmed cell death, secondary metabolic process;C:cellular_component unknown;POBFMC.G.S.X.
0.016e-136At3g43210823396TES (TETRASPORE)Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.C.G.S.X.
0.016e-136At1g63740842678disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.016e-136At1g63730842677disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response;C:intrinsic to membrane;PMBOAFC.G.S.X.
0.013e+034At5g55670835661RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MBOFPVAC.G.S.X.
0.023e+034At5g05290830411ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.106e-240Glycine maxGmaAffx.80008.1.S1_atBM886163--2e-2At3g02570MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)C.G.S.X.
0.031e-344Hordeum vulgareContig9791_s_atContig9791--2e-3At3g02570MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)C.G.S.X.
0.033e-138Oryza sativaOs02g06744669630.m04387--1e+1At2g15327unknown proteinC.G.S.X.
0.281e-21105Populus trichocarpaPtpAffx.215459.1.S1_atpmrna29668hypothetical protein-6e-22At3g02570MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)C.G.S.X.
0.022e-138Triticum aestivumTaAffx.65101.1.A1_atBJ261708--3e-1At1g61470CCR4-NOT transcription complex protein, putativeC.G.S.X.
0.071e-859Vitis vinifera1612056_atBQ795970hypothetical protein LOC100263511-2e-8At3g02570MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)C.G.S.X.
0.063e-136Zea maysZmAffx.1096.1.A1_atAW090847--2e-1At3g02570MEE31 (MATERNAL EFFECT EMBRYO ARREST 31)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009793The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
CGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00020Link to KaPPA-View 4Hexose phosphate pool



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00051Link to KEGG PATHWAYFructose and mannose metabolism
00520Link to KEGG PATHWAYAmino sugar and nucleotide sugar metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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