CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g02555

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g02555 820627 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.59 74.7 At5g61360 836257 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.53 68.6 At2g21990 816735 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.51 66.3 At2g28640 817413 ATEXO70H5 (exocyst subunit EXO70 family protein H5) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. S.X. H.G.
0.51 66.3 At2g45310 819139 GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4) UDP-D-glucuronate 4-epimerase S.X. H.G.
0.47 61.2 At5g61710 836293 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.46 59.8 At2g20320 816551 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPB S.X. H.G.
0.44 57.2 At2g46360 819243 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.44 57.2 At4g27350 828843 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;BOPF S.X. H.G.
0.44 57.2 At2g47340 819347 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:unknown;PFOB S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
226.7 100.0 GSM154505 Arabidopsis hydrated pollen grains rep1 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
201.1 100.0 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
176.8 100.0 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
172.1 100.0 E-MEXP-1138-raw-cel-1432773226
164.7 100.0 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
142.6 99.9 E-MEXP-1138-raw-cel-1432772554
135.9 99.9 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
135.0 99.9 GSM142740 DH001_ATH1_A7-MPG1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
129.0 99.9 E-MEXP-1138-raw-cel-1432772522
123.4 99.9 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.34 1e-12 73 At5g16110 831468 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P C.G. S.X.
0.04 6e-2 38 At1g68490 843178 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P C.G. S.X.
0.01 9e-1 34 At5g64580 836579 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, metalloendopeptidase activity, nucleotide binding, zinc ion binding, ATP binding;P:unknown;C:chloroplast, chloroplast envelope;BOMFPAV C.G. S.X.
0.02 9e-1 34 At4g05410 825889 transducin family protein / WD-40 repeat family protein F:nucleotide binding, nucleic acid binding;P:mitochondrial fission;C:nucleolus, small nucleolar ribonucleoprotein complex, anaphase-promoting complex, CUL4 RING ubiquitin ligase complex;MFOBPVA C.G. S.X.
0.02 9e-1 34 At3g05190 819683 aminotransferase class IV family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM C.G. S.X.
0.02 9e-1 34 At1g74400 843781 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMB C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e+0 32 Glycine max GmaAffx.86504.1.S1_at CA800674 - - 3e+0 At3g02555 unknown protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HX09G24r_at HX09G24r - - 3e+0 At3g02555 unknown protein C.G. S.X.
0.04 2e+0 34 Oryza sativa Os05g0547600 AK102181.1 - Conserved hypothetical protein 2e+0 At3g53210 nodulin MtN21 family protein C.G. S.X.
0.11 4e-10 65 Populus trichocarpa Ptp.5514.3.S1_a_at CF232420 hypothetical protein - 2e-6 At5g16110 unknown protein C.G. S.X.
0.05 4e+0 32 Triticum aestivum Ta.3402.2.S1_x_at CA628126 - - 4e+0 At3g02555 unknown protein C.G. S.X.
0.11 3e-7 54 Vitis vinifera 1621920_at CD797740 hypothetical protein LOC100251510 - 8e-3 At1g68490 unknown protein C.G. S.X.
0.03 6e+0 30 Zea mays Zm.9310.1.A1_at BM340927 - - 1e+0 At3g03350 binding / catalytic/ oxidoreductase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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