Gene omics information

Query gene ID At3g02240
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8491.9At3g02240820386unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5368.6At1g02360837724chitinase, putativeF:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBOMFVS.X.H.G.
0.4355.3At1g02900839389RALF1 (RAPID ALKALINIZATION FACTOR 1)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.S.X.H.G.
0.4152.4At5g64100836531peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall;PFOS.X.H.G.
0.3846.7At4g28890829010protein binding / ubiquitin-protein ligase/ zinc ion bindingF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVBS.X.H.G.
0.3235.7At2g21045816639-F:unknown;P:aging;C:unknown;BOPAFMS.X.H.G.
0.3235.7At2g44790819088UCC2 (UCLACYANIN 2)Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.S.X.H.G.
0.3235.7At3g01190821314peroxidase 27 (PER27) (P27) (PRXR7)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.3133.8At1g51860841613leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.3032.1At3g09270820083ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
327.3100.0E-MEXP-1094-raw-cel-1379507273
287.3100.0E-MEXP-1094-raw-cel-1379507313
109.099.9GSM179959Arabidopsis roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
104.499.9E-MEXP-807-raw-cel-1173272832
86.299.9E-MEXP-635-raw-cel-912819840
85.599.9E-MEXP-807-raw-cel-1173272948
84.499.9E-MEXP-637-raw-cel-913039196
69.699.9E-MEXP-637-raw-cel-913038938
69.599.9E-MEXP-635-raw-cel-912819824
59.199.8GSM179976Arabidopsis ein2 mutant roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.604e-39161At3g022426240491unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.031e-136At2g24490816985RPA2 (REPLICON PROTEIN A2)Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.C.G.S.X.
0.016e-134At1g44120841015C2 domain-containing protein / armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;PMOFBAC.G.S.X.
0.022e+032At5g07790830672unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MBOPFVC.G.S.X.
0.022e+032At5g61380836259TOC1 (TIMING OF CAB EXPRESSION 1)Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.C.G.S.X.
0.022e+032At4g20820827830FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:unknown;FBPOAMC.G.S.X.
0.012e+032At4g31110829238kinaseF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-240Glycine maxGmaAffx.38173.1.S1_atBU927495--1e-2At3g02240unknown proteinC.G.S.X.
0.063e-134Hordeum vulgareHB25C07r_x_atHB25C07r--2e+0At5g61130PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1)C.G.S.X.
0.061e+034Oryza sativaOs01g09155019629.m06824--6e-1At3g02240unknown proteinC.G.S.X.
0.048e-134Populus trichocarpaPtpAffx.57339.1.A1_atCV227427--9e-1At3g02240unknown proteinC.G.S.X.
0.056e-134Triticum aestivumTa.17955.1.S1_atCA626445--6e-1At3g02240unknown proteinC.G.S.X.
0.047e-132Vitis vinifera1621412_atCD800872hypothetical protein LOC100265840-4e+0At3g02240unknown proteinC.G.S.X.
0.051e+032Zea maysZm.14129.2.S1_atAI677373--3e-19At5g2806040S ribosomal protein S24 (RPS24B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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