Gene omics information

Query gene ID At3g02170
Gene name LNG2 (LONGIFOLIA2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At3g02170821279LNG2 (LONGIFOLIA2)Encodes LONGIFOLIA2 (LNG2). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG2 homologue LNG1 (At5g15580) has similar function.S.X.H.G.
0.3338.1At3g07010819886pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;PBFOS.X.H.G.
0.2522.6At4g23820828482glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAS.X.H.G.
0.2217.5At3g20820821630leucine-rich repeat family proteinF:protein binding;P:signal transduction, defense response;C:apoplast, cell wall, chloroplast, membrane;PMOBFAS.X.H.G.
0.2014.4At1g33240840218AT-GTL1 (GT2-LIKE 1)Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone.S.X.H.G.
0.1811.4At3g16850820938glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:vacuole, plant-type cell wall;PBFOMAS.X.H.G.
0.146.8At3g01690821094-F:unknown;P:unknown;C:unknown;OBMPFVAS.X.H.G.
0.135.8At1g18620838443unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVS.X.H.G.
0.124.9At2g26910817232PDR4 (PLEIOTROPIC DRUG RESISTANCE 4)F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMFAPVS.X.H.G.
0.114.1At3g04910819651WNK1 (WITH NO LYSINE (K) 1)Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.499.6GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
23.199.6GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
23.099.6GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
22.199.6GSM226272phyAphyB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
21.799.6GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
21.299.6GSM131589ATGE_35_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
20.999.6GSM131588ATGE_35_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
20.499.6E-MEXP-265-raw-cel-414619001
20.399.6GSM133253RIKEN-GODA11A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
18.099.5GSM131590ATGE_35_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.362e-33145At5g15580831411LNG1 (LONGIFOLIA1)Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG1 homologue LNG2 (At3g02170) has similar function.C.G.S.X.
0.052e-30135At5g155816241099unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.026e-344At1g18620838443unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVC.G.S.X.
0.019e-240At3g27190822338uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putativeF:uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding;P:biosynthetic process, metabolic process;C:unknown;BOMPFAVC.G.S.X.
0.013e-138At5g65687836697transporter-relatedF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:biological_process unknown;C:plasma membrane, membrane;BFOMAPC.G.S.X.
0.013e-138At3g08640820011alphavirus core protein familyF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, chloroplast, plastid, chloroplast envelope;MBPOFVAC.G.S.X.
0.011e+036At4g16630827364DEAD/DEAH box helicase, putative (RH28)F:helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding;P:unknown;C:cellular_component unknown;MBOFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-140Glycine maxGmaAffx.64396.1.S1_atBU926459--8e-1At4g35590RWP-RK domain-containing proteinC.G.S.X.
0.013e+034Hordeum vulgareContig25604_atContig25604--2e+0At3g58130N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-relatedC.G.S.X.
0.012e-140Oryza sativaOs03g0603600AK071836.1-Glycerophosphoryl diester phosphodiesterase familyprotein2e-4At5g08030glycerophosphoryl diester phosphodiesterase family proteinC.G.S.X.
0.045e-1067Populus trichocarpaPtpAffx.214003.1.S1_atpmrna27278hypothetical protein-5e-10At3g02170LNG2 (LONGIFOLIA2)C.G.S.X.
0.014e-138Triticum aestivumTa.6862.2.S1_x_atCA639828--1e+0At1g80290glycosyltransferase family protein 47C.G.S.X.
0.024e-446Vitis vinifera1613019_atCD718307hypothetical protein LOC100266999-5e+0At5g66060iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsC.G.S.X.
0.012e+034Zea maysZm.9203.1.A1_atBM267305retrotransposon protein-1e+0At1g48010invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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